Substance use, excluding alcohol

F5_SUBSNOALCO

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

None

0 out of 7 registries used, show all original rules.

0

4. Check minimum number of events

None

0

5. Include endpoints

8319

6. Filter based on genotype QC (FinnGen only)

7905

Control definitions (FinnGen only)

Control exclude F5_SUBSTANCE

Extra metadata

Level in the ICD hierarchy C
First used in FinnGen datafreeze DF2

Similar endpoints

List of similar endpoints to Substance use, excluding alcohol based on the number of shared cases.

Venn diagram with an highlighted set fully inside another set Similar with more cases:

Venn diagram with a set fully inside an highlighted set Similar with less cases:

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 98359 36314 61289
Only index persons 83970 32300 51670
Unadjusted period prevalence (%)
Whole population 1.46 1.04 1.71
Only index persons 1.67 1.19 1.97
Median age at first event (years)
Whole population 34.02 37.28 32.00
Only index persons 32.54 35.38 30.77

-FinnGen-

Key figures

All Female Male
Number of individuals 7905 3740 4165
Unadjusted period prevalence (%) 1.80 1.47 2.09
Median age at first event (years) 39.89 40.09 39.72

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint F5_SUBSNOALCO and mortality.

Females

Parameter HR [95% CI] p-value
F5_SUBSNOALCO 4.069 [3.6, 4.6] < 0.001
Birth year 0.995 [0.99, 1.0] 0.226

During the follow-up period (1.1.1998 — 31.12.2019), 4077 out of 26104 females with F5_SUBSNOALCO died.

Males

Parameter HR [95% CI] p-value
F5_SUBSNOALCO 5.055 [4.51, 5.66] < 0.001
Birth year 0.984 [0.98, 0.99] < 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 8442 out of 42072 males with F5_SUBSNOALCO died.

Mortality risk

Mortality risk for people of age

years, who have F5_SUBSNOALCO.

N-year risk Females Males
1 0.455% 0.677%
5 1.947% 4.471%
10 5.294% 12.143%
15 10.551% 21.481%
20 17.583% 34.883%

Relationships between endpoints

Index endpoint: F5_SUBSNOALCO – Substance use, excluding alcohol

GWS hits: 3

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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