Disorders of skin appendages

L12_DISORDSKINAPPENDIX

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L60-L75
  • Cause of death: ICD-10 L60-L75

2 out of 7 registries used, show all original rules.

20538

4. Check minimum number of events

None

20538

5. Include endpoints

21945

6. Filter based on genotype QC (FinnGen only)

21047

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy 2
First used in FinnGen datafreeze DF2

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 193805 101378 91472
Only index persons 183504 97227 86277
Unadjusted period prevalence (%)
Whole population 2.73 2.90 2.56
Only index persons 3.44 3.57 3.29
Median age at first event (years)
Whole population 35.02 38.23 31.43
Only index persons 34.72 38.11 30.91

-FinnGen-

Key figures

All Female Male
Number of individuals 21047 13037 8010
Unadjusted period prevalence (%) 4.70 5.12 4.02
Median age at first event (years) 45.96 44.02 49.13

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint L12_DISORDSKINAPPENDIX and mortality.

Females

Parameter HR [95% CI] p-value
L12_DISORDSKINAPPENDIX 1.177 [1.07, 1.29] < 0.001
Birth year 0.995 [0.99, 1.0] 0.204

During the follow-up period (1.1.1998 — 31.12.2019), 5479 out of 70350 females with L12_DISORDSKINAPPENDIX died.

Males

Parameter HR [95% CI] p-value
L12_DISORDSKINAPPENDIX 1.373 [1.25, 1.51] < 0.001
Birth year 0.986 [0.98, 0.99] 0.002

During the follow-up period (1.1.1998 — 31.12.2019), 6935 out of 64572 males with L12_DISORDSKINAPPENDIX died.

Mortality risk

Mortality risk for people of age

years, who have L12_DISORDSKINAPPENDIX.

N-year risk Females Males
1 0.083% 0.273%
5 0.739% 1.611%
10 1.718% 3.918%
15 3.406% 7.237%
20 5.931% 12.181%

Relationships between endpoints

Index endpoint: L12_DISORDSKINAPPENDIX – Disorders of skin appendages

GWS hits: 6

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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