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Hair colour and hair shaft abnormalities

DOID Endpoint Browser PheWeb

L12_HAIRCOLOUR

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — L67
  • Hospital discharge: ICD-9 — 7042|7043
  • Hospital discharge: ICD-8 — 7040[2-3]|7040[7-9]
  • Hospital discharge: excluded ICD-8 — 70708
  • Cause of death: ICD-10 — L67
  • Cause of death: ICD-9 — 7042|7043
  • Cause of death: ICD-8 — 7040[2-3]|7040[7-9]
  • Cause of death: excluded ICD-8 — 70708

2 out of 7 registries used, show all original rules.

130

4. Check minimum number of events

None

130

5. Include endpoints

None

130

6. Filter based on genotype QC (FinnGen only)

124

Control definitions (FinnGen only)

Control exclude L12_DISORDSKINAPPENDIX

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 L60-L75
Name in latin Abnormitates coloris et scapi pilorum

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 1104 455 638
Only index persons 890 379 511
Unadjusted period prevalence (%)
Whole population 0.02 0.01 0.02
Only index persons 0.02 0.01 0.02
Median age at first event (years)
Whole population 27.61 26.71 28.05
Only index persons 25.97 25.46 26.35

-FinnGen-

Key figures

All Female Male
Number of individuals 124 51 73
Unadjusted period prevalence (%) 0.03 0.02 0.04
Median age at first event (years) 27.96 24.90 30.09

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

No data

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

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Association

Association between endpoint L12_HAIRCOLOUR and mortality.

Females

No data

Males

No data

Mortality risk

Mortality risk for people of age

years, who have L12_HAIRCOLOUR.

N-year risk Females Males
1 No data No data
5 No data No data
10 No data No data
15 No data No data
20 No data No data

Relationships between endpoints

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Index endpoint: L12_HAIRCOLOUR – Hair colour and hair shaft abnormalities

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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