Disorders of lipoprotein metabolism and other lipidaemias

E4_LIPOPROT

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 E78
  • Cause of death: ICD-10 E78

2 out of 7 registries used, show all original rules.

52514

4. Check minimum number of events

None

52514

5. Include endpoints

52879

6. Filter based on genotype QC (FinnGen only)

50955

Control definitions (FinnGen only)

Control exclude E4_METABOLIA

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 E70-E90
Name in latin Perturbationes metabolismi lipoproteinorum et aliae lipidaemiae

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 398449 188303 209042
Only index persons 382836 182541 200295
Unadjusted period prevalence (%)
Whole population 5.62 5.39 5.84
Only index persons 7.20 6.71 7.65
Median age at first event (years)
Whole population 67.97 70.89 65.36
Only index persons 67.99 70.85 65.39

-FinnGen-

Key figures

All Female Male
Number of individuals 50955 22827 28128
Unadjusted period prevalence (%) 11.81 8.97 14.13
Median age at first event (years) 66.22 66.98 65.61

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint E4_LIPOPROT and mortality.

Females

Parameter HR [95% CI] p-value
E4_LIPOPROT 1.241 [1.13, 1.36] < 0.001
Birth year 0.993 [0.99, 1.0] 0.107

During the follow-up period (1.1.1998 — 31.12.2019), 33321 out of 150079 females with E4_LIPOPROT died.

Males

Parameter HR [95% CI] p-value
E4_LIPOPROT 1.327 [1.2, 1.47] < 0.001
Birth year 0.987 [0.98, 1.0] 0.005

During the follow-up period (1.1.1998 — 31.12.2019), 37803 out of 167231 males with E4_LIPOPROT died.

Mortality risk

Mortality risk for people of age

years, who have E4_LIPOPROT.

N-year risk Females Males
1 0.097% 0.224%
5 0.587% 1.361%
10 1.487% 3.347%
15 2.85% 6.443%
20 4.88% 10.784%

Relationships between endpoints

Index endpoint: E4_LIPOPROT – Disorders of lipoprotein metabolism and other lipidaemias

GWS hits: 45

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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