Pure hypercholesterolaemia

E4_HYPERCHOL

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 E78.0
  • Hospital discharge: ICD-9 2720
  • Hospital discharge: ICD-8 2720
  • Cause of death: ICD-10 E78.0
  • Cause of death: ICD-9 2720
  • Cause of death: ICD-8 2720

2 out of 7 registries used, show all original rules.

37649

4. Check minimum number of events

None

37649

5. Include endpoints

37649

6. Filter based on genotype QC (FinnGen only)

36338

Control definitions (FinnGen only)

Control exclude E4_METABOLIA

Extra metadata

Level in the ICD hierarchy 4
First used in FinnGen datafreeze DF2
Parent code in ICD-10 E78
Name in latin Hypercholesterolaemia pura

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 284005 137350 145983
Only index persons 274601 133710 140891
Unadjusted period prevalence (%)
Whole population 4.00 3.93 4.08
Only index persons 5.15 4.92 5.38
Median age at first event (years)
Whole population 69.04 71.71 66.56
Only index persons 69.09 71.70 66.60

-FinnGen-

Key figures

All Female Male
Number of individuals 36338 16604 19734
Unadjusted period prevalence (%) 8.36 6.52 9.91
Median age at first event (years) 67.23 67.80 66.76

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint E4_HYPERCHOL and mortality.

Females

Parameter HR [95% CI] p-value
E4_HYPERCHOL 1.374 [1.23, 1.53] < 0.001
Birth year 0.988 [0.98, 1.0] 0.004

During the follow-up period (1.1.1998 — 31.12.2019), 22764 out of 105618 females with E4_HYPERCHOL died.

Males

Parameter HR [95% CI] p-value
E4_HYPERCHOL 1.355 [1.21, 1.51] < 0.001
Birth year 0.984 [0.97, 0.99] < 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 24857 out of 112949 males with E4_HYPERCHOL died.

Mortality risk

Mortality risk for people of age

years, who have E4_HYPERCHOL.

N-year risk Females Males
1 0.123% 0.217%
5 0.632% 1.297%
10 1.417% 3.329%
15 2.743% 6.38%
20 4.845% 10.705%

Relationships between endpoints

Index endpoint: E4_HYPERCHOL – Pure hypercholesterolaemia

GWS hits: 52

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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