Familial hypercholesterolemia

E4_FH

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 E78.00
  • Hospital discharge: ICD-9 2720A
  • Cause of death: ICD-10 E78.00
  • Cause of death: ICD-9 2720A

2 out of 7 registries used, show all original rules.

6045

4. Check minimum number of events

None

6045

5. Include endpoints

None

6045

6. Filter based on genotype QC (FinnGen only)

5834

Control definitions (FinnGen only)

Control exclude E4_METABOLIA

Extra metadata

Level in the ICD hierarchy 5
First used in FinnGen datafreeze DF6v3

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 51090 24106 26865
Only index persons 48827 23192 25635
Unadjusted period prevalence (%)
Whole population 0.72 0.69 0.75
Only index persons 0.92 0.85 0.98
Median age at first event (years)
Whole population 68.34 71.31 65.66
Only index persons 68.32 71.27 65.66

-FinnGen-

Key figures

All Female Male
Number of individuals 5834 2382 3452
Unadjusted period prevalence (%) 1.41 0.94 1.73
Median age at first event (years) 65.48 65.69 65.34

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint E4_FH and mortality.

Females

Parameter HR [95% CI] p-value
E4_FH 1.354 [1.23, 1.49] < 0.001
Birth year 0.994 [0.99, 1.0] 0.143

During the follow-up period (1.1.1998 — 31.12.2019), 6158 out of 21580 females with E4_FH died.

Males

Parameter HR [95% CI] p-value
E4_FH 1.442 [1.31, 1.59] < 0.001
Birth year 0.989 [0.98, 1.0] 0.012

During the follow-up period (1.1.1998 — 31.12.2019), 7033 out of 24176 males with E4_FH died.

Mortality risk

Mortality risk for people of age

years, who have E4_FH.

N-year risk Females Males
1 0.123% 0.314%
5 0.761% 1.636%
10 1.933% 4.213%
15 3.509% 8.179%
20 6.254% 13.691%

Relationships between endpoints

Index endpoint: E4_FH – Familial hypercholesterolemia

GWS hits: 22

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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