Other degenerative diseases of the nervous system

NEURODEGOTH

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

2 out of 7 registries used, show all original rules.

16821

4. Check minimum number of events

None

16821

5. Include endpoints

16991

6. Filter based on genotype QC (FinnGen only)

16347

Control definitions (FinnGen only)

Control exclude NEURODIS

Extra metadata

First used in FinnGen datafreeze DF2

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 276325 168911 105057
Only index persons 228452 143276 85176
Unadjusted period prevalence (%)
Whole population 4.09 4.84 2.94
Only index persons 4.52 5.27 3.25
Median age at first event (years)
Whole population 80.45 81.70 78.52
Only index persons 80.95 82.09 79.04

-FinnGen-

Key figures

All Female Male
Number of individuals 16347 8088 8259
Unadjusted period prevalence (%) 3.67 3.18 4.15
Median age at first event (years) 76.71 75.33 78.07

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint NEURODEGOTH and mortality.

Females

Parameter HR [95% CI] p-value
NEURODEGOTH 2.553 [2.33, 2.79] < 0.001
Birth year 0.99 [0.98, 1.0] 0.01

During the follow-up period (1.1.1998 — 31.12.2019), 78730 out of 129205 females with NEURODEGOTH died.

Males

Parameter HR [95% CI] p-value
NEURODEGOTH 3.045 [2.7, 3.44] < 0.001
Birth year 0.983 [0.97, 0.99] < 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 50139 out of 78476 males with NEURODEGOTH died.

Mortality risk

Mortality risk for people of age

years, who have NEURODEGOTH.

N-year risk Females Males
1 0.184% 0.379%
5 0.942% 2.318%
10 2.505% 6.245%
15 4.559% 11.722%
20 7.723% 18.875%

Relationships between endpoints

Index endpoint: NEURODEGOTH – Other degenerative diseases of the nervous system

GWS hits: 6

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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