Degeneration of the brain due to alcohol

G6_ALCODEGEN

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 G31.2
  • Cause of death: ICD-10 G31.2

2 out of 7 registries used, show all original rules.

721

4. Check minimum number of events

None

721

5. Include endpoints

None

721

6. Filter based on genotype QC (FinnGen only)

697

Control definitions (FinnGen only)

Control exclude G6_NEURODEG

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 G31
Name in latin Degeneratio systematis nervosi ex alcohol (aethylico)

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 12921 2765 9998
Only index persons 10336 2353 7983
Unadjusted period prevalence (%)
Whole population 0.24 0.08 0.28
Only index persons 0.26 0.09 0.30
Median age at first event (years)
Whole population 58.75 58.87 58.62
Only index persons 58.94 59.19 58.87

-FinnGen-

Key figures

All Female Male
Number of individuals 697 112 585
Unadjusted period prevalence (%) 0.25 0.04 0.29
Median age at first event (years) 59.57 57.66 59.93

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint G6_ALCODEGEN and mortality.

Females

Parameter HR [95% CI] p-value
G6_ALCODEGEN 7.086 [6.16, 8.15] < 0.001
Birth year 0.994 [0.99, 1.0] 0.159

During the follow-up period (1.1.1998 — 31.12.2019), 1024 out of 2337 females with G6_ALCODEGEN died.

Males

Parameter HR [95% CI] p-value
G6_ALCODEGEN 5.864 [5.32, 6.46] < 0.001
Birth year 0.987 [0.98, 1.0] 0.005

During the follow-up period (1.1.1998 — 31.12.2019), 4483 out of 8289 males with G6_ALCODEGEN died.

Mortality risk

Mortality risk for people of age

years, who have G6_ALCODEGEN.

N-year risk Females Males
1 0.797% 1.179%
5 3.618% 6.351%
10 9.524% 14.645%
15 18.008% 27.105%
20 29.468% 41.761%

Relationships between endpoints

Index endpoint: G6_ALCODEGEN – Degeneration of the brain due to alcohol

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
loading spinner Loading data