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Implicit bacterial Sepsis

Endpoint Browser

AB1_SEPSIS_BACT_IMPL

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

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1. Apply sex-specific rule

None

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2. Check conditions

  • AB1_SEPSIS_CONDITION
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3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — A0[0-5]|A19|A2[0-8]A3[0-2]|A3[6-9]|A4[2-4]|A4|A54|A69[0-1]|A699|A70|A7[4-5]|A7[7-9]|B9[56]|G0[01]|J1[3-5]
  • Hospital discharge: ICD-9 — 00[1-5]|008[0-5]|018|02[0-7]|03[0-6]|039|04[0-1]|073|0770A|0779X|0783A|08[0-3]|0880A|098|10[01]|1049|320|481|482|4830A|7907A
  • Cause of death: ICD-10 — A0[0-5]|A19|A2[0-8]A3[0-2]|A3[6-9]|A4[2-4]|A4|A54|A69[0-1]|A699|A70|A7[4-5]|A7[7-9]|B9[56]|G0[01]|J1[3-5]
  • Cause of death: ICD-9 — 00[1-5]|008[0-5]|018|02[0-7]|03[0-6]|039|04[0-1]|073|0770A|0779X|0783A|08[0-3]|0880A|098|10[01]|1049|320|481|482|4830A|7907A

2 out of 7 registries used, show all original rules.

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4. Check minimum number of events

None

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5. Include endpoints

None

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6. Filter based on genotype QC (FinnGen only)

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Control definitions (FinnGen only)

Extra metadata

First used in FinnGen datafreeze DF8

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 16035 6257 9778
Unadjusted period prevalence (%) 3.95 2.46 4.91
Median age at first event (years) 67.40 65.49 68.63

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

Mortality – FinRegistry

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This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

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Index endpoint: AB1_SEPSIS_BACT_IMPL – Implicit bacterial Sepsis

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).