Dementia in Alzheimer disease

F5_ALZHDEMENT

Alzheimer's disease: A progressive, neurodegenerative disease characterized by loss of function and death of nerve cells in several areas of the brain leading to loss of cognitive function such as memory and language.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 F00*
  • Hospital discharge: ICD-8 29010
  • Cause of death: ICD-10 F00*
  • Cause of death: ICD-8 29010

2 out of 7 registries used, show all original rules.

6971

4. Check minimum number of events

None

6971

5. Include endpoints

None

6971

6. Filter based on genotype QC (FinnGen only)

6741

Control definitions (FinnGen only)

Control exclude F5_ORGANIC

Extra metadata

Level in the ICD hierarchy 4
First used in FinnGen datafreeze DF3

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 128670 81960 45831
Only index persons 110175 71387 38788
Unadjusted period prevalence (%)
Whole population 1.96 2.35 1.28
Only index persons 2.22 2.62 1.48
Median age at first event (years)
Whole population 82.30 83.00 81.09
Only index persons 82.63 83.30 81.39

-FinnGen-

Key figures

All Female Male
Number of individuals 6741 3063 3678
Unadjusted period prevalence (%) 1.55 1.20 1.85
Median age at first event (years) 80.49 80.39 80.56

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint F5_ALZHDEMENT and mortality.

Females

Parameter HR [95% CI] p-value
F5_ALZHDEMENT 2.398 [2.17, 2.65] < 0.001
Birth year 0.991 [0.98, 1.0] 0.03

During the follow-up period (1.1.1998 — 31.12.2019), 48483 out of 70483 females with F5_ALZHDEMENT died.

Males

Parameter HR [95% CI] p-value
F5_ALZHDEMENT 2.838 [2.47, 3.27] < 0.001
Birth year 0.988 [0.98, 1.0] 0.006

During the follow-up period (1.1.1998 — 31.12.2019), 27543 out of 38138 males with F5_ALZHDEMENT died.

Mortality risk

Mortality risk for people of age

years, who have F5_ALZHDEMENT.

N-year risk Females Males
1 0.185% 0.525%
5 1.168% 2.954%
10 3.006% 7.145%
15 5.373% 13.483%
20 9.032% 22.437%

Relationships between endpoints

Index endpoint: F5_ALZHDEMENT – Dementia in Alzheimer disease

GWS hits: 8

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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