Alzheimer’s disease, wide definition

G6_AD_WIDE

Alzheimer's disease: A progressive, neurodegenerative disease characterized by loss of function and death of nerve cells in several areas of the brain leading to loss of cognitive function such as memory and language.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 F00*, G30
  • Hospital discharge: ICD-9 3310
  • Hospital discharge: ICD-8 29010
  • Cause of death: ICD-10 F00*, G30
  • Cause of death: ICD-9 3310
  • Cause of death: ICD-8 29010
  • KELA reimbursements: KELA codes 307
  • KELA reimbursements: ICD-10 F00*, G30
  • Medicine purchases: ATC N06D

4 out of 7 registries used, show all original rules.

17523

4. Check minimum number of events

Min. number of events 3
17523

5. Include endpoints

17523

6. Filter based on genotype QC (FinnGen only)

16902

Control definitions (FinnGen only)

Control exclude G6_ALZHEIMER

Extra metadata

First used in FinnGen datafreeze DF3

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 296681 184829 109969
Only index persons 255430 161059 94371
Unadjusted period prevalence (%)
Whole population 4.45 5.29 3.07
Only index persons 5.06 5.92 3.60
Median age at first event (years)
Whole population 80.87 81.69 79.54
Only index persons 81.07 81.88 79.69

-FinnGen-

Key figures

All Female Male
Number of individuals 16902 7607 9295
Unadjusted period prevalence (%) 3.91 2.99 4.67
Median age at first event (years) 79.10 79.21 79.01

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint G6_AD_WIDE and mortality.

Females

Parameter HR [95% CI] p-value
G6_AD_WIDE 2.209 [2.02, 2.41] < 0.001
Birth year 0.987 [0.98, 0.99] 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 94565 out of 156946 females with G6_AD_WIDE died.

Males

Parameter HR [95% CI] p-value
G6_AD_WIDE 2.25 [2.01, 2.52] < 0.001
Birth year 0.984 [0.98, 0.99] < 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 57338 out of 92451 males with G6_AD_WIDE died.

Mortality risk

Mortality risk for people of age

years, who have G6_AD_WIDE.

N-year risk Females Males
1 0.116% 0.358%
5 0.728% 2.175%
10 1.889% 5.058%
15 3.633% 9.382%
20 6.035% 15.046%

Relationships between endpoints

Index endpoint: G6_AD_WIDE – Alzheimer’s disease, wide definition

GWS hits: 21

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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