Benign neoplasm of middle ear and respiratory system

CD2_BENIGN_EAR_RESP

cutaneous melanoma: A primary melanoma arising from atypical melanocytes in the skin. Precursor lesions include acquired and congenital melanocytic nevi, and dysplastic nevi. Several histologic variants have been recognized, including superficial spreading melanoma, acral lentiginous melanoma, nodular melanoma, and lentigo maligna melanoma.

Suggest a new description

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 D14
  • Cause of death: ICD-10 D14

2 out of 7 registries used, show all original rules.

2409

4. Check minimum number of events

None

2409

5. Include endpoints

2832

6. Filter based on genotype QC (FinnGen only)

2736

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy 2
First used in FinnGen datafreeze DF2
Parent code in ICD-10 D10-D36
Name in latin Neoplasma benignum auris mediae sive systematis respiratorii

Similar endpoints

List of similar endpoints to Benign neoplasm of middle ear and respiratory system based on the number of shared cases.

Venn diagram with an highlighted set fully inside another set Similar with more cases:

Venn diagram with a set fully inside an highlighted set Similar with less cases:

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 20664 8807 11667
Only index persons 17527 7830 9697
Unadjusted period prevalence (%)
Whole population 0.29 0.25 0.33
Only index persons 0.33 0.29 0.37
Median age at first event (years)
Whole population 55.29 55.15 55.31
Only index persons 53.78 53.91 53.68

-FinnGen-

Key figures

All Female Male
Number of individuals 2736 1137 1599
Unadjusted period prevalence (%) 0.65 0.45 0.80
Median age at first event (years) 56.33 52.95 58.73

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint CD2_BENIGN_EAR_RESP and mortality.

Females

Parameter HR [95% CI] p-value
CD2_BENIGN_EAR_RESP 1.387 [1.24, 1.55] < 0.001
Birth year 0.992 [0.98, 1.0] 0.056

During the follow-up period (1.1.1998 — 31.12.2019), 1065 out of 5721 females with CD2_BENIGN_EAR_RESP died.

Males

Parameter HR [95% CI] p-value
CD2_BENIGN_EAR_RESP 1.589 [1.44, 1.76] < 0.001
Birth year 0.984 [0.97, 0.99] < 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 1926 out of 7557 males with CD2_BENIGN_EAR_RESP died.

Mortality risk

Mortality risk for people of age

years, who have CD2_BENIGN_EAR_RESP.

N-year risk Females Males
1 0.112% 0.271%
5 0.805% 1.641%
10 1.946% 4.303%
15 3.24% 7.829%
20 5.823% 12.915%

Relationships between endpoints

Index endpoint: CD2_BENIGN_EAR_RESP – Benign neoplasm of middle ear and respiratory system

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
loading spinner Loading data