Other localized connective tissue disorders

L12_LOCALDCONNECTISSUEOTH

connective tissue disease: A disorder characterized by abnormalities in one or more of the elements of the connective tissues, typically associated with genetic defects.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L94
  • Cause of death: ICD-10 L94

2 out of 7 registries used, show all original rules.

612

4. Check minimum number of events

None

612

5. Include endpoints

632

6. Filter based on genotype QC (FinnGen only)

601

Control definitions (FinnGen only)

Control exclude L12_OTHERSKINSUBCUTIS

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 L80-L99
Name in latin Aliae morbositates localisatae textus connectivi

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 4269 3191 1056
Only index persons 3949 2982 967
Unadjusted period prevalence (%)
Whole population 0.08 0.09 0.03
Only index persons 0.09 0.11 0.04
Median age at first event (years)
Whole population 53.91 55.68 48.45
Only index persons 53.10 55.18 46.69

-FinnGen-

Key figures

All Female Male
Number of individuals 601 481 120
Unadjusted period prevalence (%) 0.16 0.19 0.06
Median age at first event (years) 55.39 55.77 53.87

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint L12_LOCALDCONNECTISSUEOTH and mortality.

Females

Parameter HR [95% CI] p-value
L12_LOCALDCONNECTISSUEOTH 1.609 [1.39, 1.87] < 0.001
Birth year 0.987 [0.98, 1.0] 0.004

During the follow-up period (1.1.1998 — 31.12.2019), 414 out of 2658 females with L12_LOCALDCONNECTISSUEOTH died.

Males

Parameter HR [95% CI] p-value
L12_LOCALDCONNECTISSUEOTH 1.885 [1.5, 2.36] < 0.001
Birth year 0.985 [0.98, 0.99] 0.003

During the follow-up period (1.1.1998 — 31.12.2019), 166 out of 878 males with L12_LOCALDCONNECTISSUEOTH died.

Mortality risk

Mortality risk for people of age

years, who have L12_LOCALDCONNECTISSUEOTH.

N-year risk Females Males
1 0.132% 0.253%
5 0.812% 1.947%
10 1.838% 5.043%
15 3.557% 9.345%
20 6.019% 15.559%

Relationships between endpoints

Index endpoint: L12_LOCALDCONNECTISSUEOTH – Other localized connective tissue disorders

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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