Lichen simplex chronicus and prurigo

L12_LICHSIMPANDPRURIGO

neurodermatitis: an itchy skin disease similar to atopic dermatitis. It tends to result in focal patches—one or many—that are due to frequent rubbing or scratching of the same area over time.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L28
  • Cause of death: ICD-10 L28

2 out of 7 registries used, show all original rules.

2086

4. Check minimum number of events

None

2086

5. Include endpoints

2182

6. Filter based on genotype QC (FinnGen only)

2104

Control definitions (FinnGen only)

Control exclude L12_DERMATITISECZEMA

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 L20-L30
Name in latin Neurodermatitis

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 17097 9353 7639
Only index persons 15358 8556 6802
Unadjusted period prevalence (%)
Whole population 0.24 0.27 0.21
Only index persons 0.29 0.31 0.26
Median age at first event (years)
Whole population 56.19 56.86 55.37
Only index persons 55.35 55.98 54.56

-FinnGen-

Key figures

All Female Male
Number of individuals 2104 1223 881
Unadjusted period prevalence (%) 0.46 0.48 0.44
Median age at first event (years) 56.24 55.13 57.77

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint L12_LICHSIMPANDPRURIGO and mortality.

Females

Parameter HR [95% CI] p-value
L12_LICHSIMPANDPRURIGO 1.42 [1.28, 1.58] < 0.001
Birth year 0.996 [0.99, 1.0] 0.288

During the follow-up period (1.1.1998 — 31.12.2019), 1395 out of 7396 females with L12_LICHSIMPANDPRURIGO died.

Males

Parameter HR [95% CI] p-value
L12_LICHSIMPANDPRURIGO 1.511 [1.36, 1.68] < 0.001
Birth year 0.988 [0.98, 1.0] 0.018

During the follow-up period (1.1.1998 — 31.12.2019), 1474 out of 6002 males with L12_LICHSIMPANDPRURIGO died.

Mortality risk

Mortality risk for people of age

years, who have L12_LICHSIMPANDPRURIGO.

N-year risk Females Males
1 0.126% 0.335%
5 0.773% 1.944%
10 1.863% 4.649%
15 3.905% 8.447%
20 7.104% 14.341%

Relationships between endpoints

Index endpoint: L12_LICHSIMPANDPRURIGO – Lichen simplex chronicus and prurigo

GWS hits: 2

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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