DVT of lower extremities

I9_PHLETHROMBDVTLOW

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

2 out of 7 registries used, show all original rules.

7470

4. Check minimum number of events

None

7470

5. Include endpoints

None

7470

6. Filter based on genotype QC (FinnGen only)

7216

Control definitions (FinnGen only)

Control exclude I9_DISVEINLYMPH

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF10

Similar endpoints

List of similar endpoints to DVT of lower extremities based on the number of shared cases.

Venn diagram with an highlighted set fully inside another set Similar with more cases:

Venn diagram with a set fully inside an highlighted set Similar with less cases:

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 75938 40582 34466
Only index persons 57445 31327 26118
Unadjusted period prevalence (%)
Whole population 1.07 1.16 0.96
Only index persons 1.08 1.15 1.00
Median age at first event (years)
Whole population 64.23 66.20 61.83
Only index persons 61.18 62.72 59.33

-FinnGen-

Key figures

All Female Male
Number of individuals 7216 3716 3500
Unadjusted period prevalence (%) 1.60 1.46 1.76
Median age at first event (years) 58.86 56.99 60.84

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint I9_PHLETHROMBDVTLOW and mortality.

Females

Parameter HR [95% CI] p-value
I9_PHLETHROMBDVTLOW 1.956 [1.79, 2.14] < 0.001
Birth year 0.995 [0.99, 1.0] 0.174

During the follow-up period (1.1.1998 — 31.12.2019), 8481 out of 23064 females with I9_PHLETHROMBDVTLOW died.

Males

Parameter HR [95% CI] p-value
I9_PHLETHROMBDVTLOW 1.787 [1.62, 1.97] < 0.001
Birth year 0.986 [0.98, 0.99] 0.002

During the follow-up period (1.1.1998 — 31.12.2019), 6539 out of 19493 males with I9_PHLETHROMBDVTLOW died.

Mortality risk

Mortality risk for people of age

years, who have I9_PHLETHROMBDVTLOW.

N-year risk Females Males
1 0.157% 0.291%
5 1.053% 1.943%
10 2.745% 4.865%
15 5.114% 9.035%
20 9.384% 15.535%

Relationships between endpoints

Index endpoint: I9_PHLETHROMBDVTLOW – DVT of lower extremities

GWS hits: 20

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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