Arthropathy in Crohn disease

CROHN_ARTHR

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

2 out of 7 registries used, show all original rules.

337

4. Check minimum number of events

None

337

5. Include endpoints

None

337

6. Filter based on genotype QC (FinnGen only)

325

Control definitions (FinnGen only)

Control exclude PSOR_ENTE_ARTHR

Extra metadata

First used in FinnGen datafreeze DF2

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 1448 820 623
Only index persons 1391 801 590
Unadjusted period prevalence (%)
Whole population 0.02 0.02 0.02
Only index persons 0.03 0.03 0.02
Median age at first event (years)
Whole population 45.47 45.71 45.14
Only index persons 45.12 45.60 44.46

-FinnGen-

Key figures

All Female Male
Number of individuals 325 203 122
Unadjusted period prevalence (%) 0.07 0.08 0.06
Median age at first event (years) 44.28 43.65 45.34

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint CROHN_ARTHR and mortality.

Females

Parameter HR [95% CI] p-value
CROHN_ARTHR 1.408 [1.06, 1.87] 0.018
Birth year 0.991 [0.98, 1.0] 0.035

During the follow-up period (1.1.1998 — 31.12.2019), 60 out of 730 females with CROHN_ARTHR died.

Males

Parameter HR [95% CI] p-value
CROHN_ARTHR 1.394 [1.06, 1.83] 0.018
Birth year 0.985 [0.98, 1.0] 0.003

During the follow-up period (1.1.1998 — 31.12.2019), 70 out of 562 males with CROHN_ARTHR died.

Mortality risk

Mortality risk for people of age

years, who have CROHN_ARTHR.

N-year risk Females Males
1 0.125% 0.215%
5 0.773% 1.587%
10 1.813% 3.786%
15 3.506% 7.126%
20 5.89% 11.945%

Relationships between endpoints

Index endpoint: CROHN_ARTHR – Arthropathy in Crohn disease

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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