Pollen allergy

POLLENALLERG

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

2 out of 7 registries used, show all original rules.

8182

4. Check minimum number of events

None

8182

5. Include endpoints

None

8182

6. Filter based on genotype QC (FinnGen only)

7808

Control definitions (FinnGen only)

Control exclude ASTHMA_ALLERG

Extra metadata

First used in FinnGen datafreeze DF2

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 108129 50206 57693
Only index persons 94109 45353 48756
Unadjusted period prevalence (%)
Whole population 1.53 1.44 1.61
Only index persons 1.77 1.67 1.86
Median age at first event (years)
Whole population 14.16 17.11 11.52
Only index persons 16.22 19.74 12.94

-FinnGen-

Key figures

All Female Male
Number of individuals 7808 5359 2449
Unadjusted period prevalence (%) 1.83 2.10 1.23
Median age at first event (years) 30.89 31.76 28.99

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint POLLENALLERG and mortality.

Females

Parameter HR [95% CI] p-value
POLLENALLERG 0.829 [0.7, 0.98] 0.031
Birth year 0.998 [0.99, 1.01] 0.672

During the follow-up period (1.1.1998 — 31.12.2019), 503 out of 42785 females with POLLENALLERG died.

Males

Parameter HR [95% CI] p-value
POLLENALLERG 0.69 [0.59, 0.81] < 0.001
Birth year 0.991 [0.98, 1.0] 0.052

During the follow-up period (1.1.1998 — 31.12.2019), 571 out of 48491 males with POLLENALLERG died.

Mortality risk

Mortality risk for people of age

years, who have POLLENALLERG.

N-year risk Females Males
1 0.073% 0.129%
5 0.511% 0.928%
10 1.317% 2.246%
15 2.714% 4.4%
20 4.576% 7.364%

Relationships between endpoints

Index endpoint: POLLENALLERG – Pollen allergy

GWS hits: 5

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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