Chronic kidney disease

N14_CHRONKIDNEYDIS

chronic kidney disease: Impairment of the renal function secondary to chronic kidney damage persisting for three or more months.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 N18
  • Hospital discharge: ICD-9 585
  • Cause of death: ICD-10 N18
  • Cause of death: ICD-9 585
  • KELA reimbursements: KELA codes 138

3 out of 7 registries used, show all original rules.

11685

4. Check minimum number of events

None

11685

5. Include endpoints

11734

6. Filter based on genotype QC (FinnGen only)

11265

Control definitions (FinnGen only)

Control exclude N14_RENFAIL

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 N17-N19
Name in latin Insufficientia renalis chronica

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 99445 42581 55795
Only index persons 79681 34461 45220
Unadjusted period prevalence (%)
Whole population 1.41 1.22 1.56
Only index persons 1.53 1.27 1.73
Median age at first event (years)
Whole population 76.93 80.00 74.64
Only index persons 77.43 80.86 74.82

-FinnGen-

Key figures

All Female Male
Number of individuals 11265 3817 7448
Unadjusted period prevalence (%) 2.98 1.50 3.74
Median age at first event (years) 71.55 70.22 72.22

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint N14_CHRONKIDNEYDIS and mortality.

Females

Parameter HR [95% CI] p-value
N14_CHRONKIDNEYDIS 3.61 [3.11, 4.18] < 0.001
Birth year 0.991 [0.98, 1.0] 0.02

During the follow-up period (1.1.1998 — 31.12.2019), 16749 out of 28850 females with N14_CHRONKIDNEYDIS died.

Males

Parameter HR [95% CI] p-value
N14_CHRONKIDNEYDIS 3.418 [2.95, 3.96] < 0.001
Birth year 0.984 [0.97, 0.99] < 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 22173 out of 39657 males with N14_CHRONKIDNEYDIS died.

Mortality risk

Mortality risk for people of age

years, who have N14_CHRONKIDNEYDIS.

N-year risk Females Males
1 0.257% 0.569%
5 1.773% 3.401%
10 4.126% 8.156%
15 8.211% 14.499%
20 14.027% 23.686%

Relationships between endpoints

Index endpoint: N14_CHRONKIDNEYDIS – Chronic kidney disease

GWS hits: 4

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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