Varus deformity, not elsewhere classified

M13_VARUS

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 M21.1
  • Hospital discharge: ICD-9 7360B|7363B|7364B
  • Hospital discharge: ICD-8 73801|73803
  • Cause of death: ICD-10 M21.1
  • Cause of death: ICD-9 7360B|7363B|7364B
  • Cause of death: ICD-8 73801|73803

2 out of 7 registries used, show all original rules.

368

4. Check minimum number of events

None

368

5. Include endpoints

None

368

6. Filter based on genotype QC (FinnGen only)

350

Control definitions (FinnGen only)

Control exclude M13_ARTHROPATHIES

Extra metadata

Level in the ICD hierarchy 4
First used in FinnGen datafreeze DF2
Parent code in ICD-10 M21
Name in latin Deformitas membri vara non alibi classificata

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 3785 2650 1120
Only index persons 3415 2455 960
Unadjusted period prevalence (%)
Whole population 0.06 0.08 0.03
Only index persons 0.08 0.09 0.04
Median age at first event (years)
Whole population 51.91 55.37 43.69
Only index persons 51.77 54.93 43.71

-FinnGen-

Key figures

All Female Male
Number of individuals 350 286 64
Unadjusted period prevalence (%) 0.10 0.11 0.03
Median age at first event (years) 50.98 51.44 48.95

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint M13_VARUS and mortality.

Females

Parameter HR [95% CI] p-value
M13_VARUS 0.983 [0.85, 1.14] 0.816
Birth year 0.994 [0.99, 1.0] 0.151

During the follow-up period (1.1.1998 — 31.12.2019), 249 out of 2081 females with M13_VARUS died.

Males

Parameter HR [95% CI] p-value
M13_VARUS 0.887 [0.73, 1.08] 0.242
Birth year 0.985 [0.98, 0.99] 0.002

During the follow-up period (1.1.1998 — 31.12.2019), 98 out of 763 males with M13_VARUS died.

Mortality risk

Mortality risk for people of age

years, who have M13_VARUS.

N-year risk Females Males
1 0.074% 0.182%
5 0.453% 1.075%
10 1.299% 2.474%
15 2.626% 4.632%
20 4.587% 7.824%

Relationships between endpoints

Index endpoint: M13_VARUS – Varus deformity, not elsewhere classified

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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