Pemphigus

L12_PEMPHIGUS

pemphigus: a rare group of blistering autoimmune diseases that affect the skin and mucous membranes.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L10
  • Cause of death: ICD-10 L10

2 out of 7 registries used, show all original rules.

196

4. Check minimum number of events

None

196

5. Include endpoints

217

6. Filter based on genotype QC (FinnGen only)

208

Control definitions (FinnGen only)

Control exclude L12_BULLOUS

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 L10-L14
Name in latin Pemphigus

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 2071 1164 893
Only index persons 1659 955 704
Unadjusted period prevalence (%)
Whole population 0.03 0.03 0.02
Only index persons 0.03 0.04 0.03
Median age at first event (years)
Whole population 60.97 62.71 58.53
Only index persons 58.01 59.23 56.35

-FinnGen-

Key figures

All Female Male
Number of individuals 208 111 97
Unadjusted period prevalence (%) 0.05 0.04 0.05
Median age at first event (years) 56.09 50.67 62.30

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint L12_PEMPHIGUS and mortality.

Females

Parameter HR [95% CI] p-value
L12_PEMPHIGUS 1.626 [1.33, 1.99] < 0.001
Birth year 0.998 [0.99, 1.01] 0.595

During the follow-up period (1.1.1998 — 31.12.2019), 277 out of 914 females with L12_PEMPHIGUS died.

Males

Parameter HR [95% CI] p-value
L12_PEMPHIGUS 1.956 [1.45, 2.64] < 0.001
Birth year 0.986 [0.98, 1.0] 0.004

During the follow-up period (1.1.1998 — 31.12.2019), 244 out of 706 males with L12_PEMPHIGUS died.

Mortality risk

Mortality risk for people of age

years, who have L12_PEMPHIGUS.

N-year risk Females Males
1 0.18% 0.394%
5 1.082% 2.301%
10 2.535% 5.646%
15 4.777% 10.27%
20 8.552% 17.108%

Relationships between endpoints

Index endpoint: L12_PEMPHIGUS – Pemphigus

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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