Pemphigus vulgaris

L12_PEMPHIGUS_VULG

pemphigus vulgaris: Pemphigus vulgaris is a rare chronic blistering skin disease and the most common form of pemphigus.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L10.0
  • Hospital discharge: ICD-9 6944A
  • Cause of death: ICD-10 L10.0
  • Cause of death: ICD-9 6944A

2 out of 7 registries used, show all original rules.

69

4. Check minimum number of events

None

69

5. Include endpoints

None

69

6. Filter based on genotype QC (FinnGen only)

67

Control definitions (FinnGen only)

Control exclude L12_BULLOUS

Extra metadata

Level in the ICD hierarchy 4
First used in FinnGen datafreeze DF2
Parent code in ICD-10 L10
Name in latin Pemphigus vulgaris

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 640 359 278
Only index persons 523 299 224
Unadjusted period prevalence (%)
Whole population 0.01 0.01 0.01
Only index persons 0.01 0.01 0.01
Median age at first event (years)
Whole population 60.66 64.02 56.61
Only index persons 57.85 60.55 54.25

-FinnGen-

Key figures

All Female Male
Number of individuals 67 40 27
Unadjusted period prevalence (%) 0.01 0.02 0.01
Median age at first event (years) 60.86 57.65 65.62

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint L12_PEMPHIGUS_VULG and mortality.

Females

Parameter HR [95% CI] p-value
L12_PEMPHIGUS_VULG 1.752 [1.25, 2.45] 0.001
Birth year 0.994 [0.99, 1.0] 0.182

During the follow-up period (1.1.1998 — 31.12.2019), 90 out of 304 females with L12_PEMPHIGUS_VULG died.

Males

Parameter HR [95% CI] p-value
L12_PEMPHIGUS_VULG 1.904 [1.16, 3.12] 0.011
Birth year 0.989 [0.98, 1.0] 0.017

During the follow-up period (1.1.1998 — 31.12.2019), 77 out of 246 males with L12_PEMPHIGUS_VULG died.

Mortality risk

Mortality risk for people of age

years, who have L12_PEMPHIGUS_VULG.

N-year risk Females Males
1 0.16% 0.421%
5 0.95% 2.362%
10 2.56% 5.591%
15 4.683% 10.843%
20 8.381% 17.73%

Relationships between endpoints

Index endpoint: L12_PEMPHIGUS_VULG – Pemphigus vulgaris

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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