Other and unspecified pemphigus

L12_PEMPHIGUS_NAS

pemphigus: a rare group of blistering autoimmune diseases that affect the skin and mucous membranes.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L10.8, L10.9
  • Hospital discharge: ICD-8 69400|69403
  • Cause of death: ICD-10 L10.8, L10.9
  • Cause of death: ICD-8 69400|69403
  • KELA reimbursements: KELA codes ANY
  • KELA reimbursements: ICD-10 L10

3 out of 7 registries used, show all original rules.

102

4. Check minimum number of events

None

102

5. Include endpoints

None

102

6. Filter based on genotype QC (FinnGen only)

97

Control definitions (FinnGen only)

Control exclude L12_BULLOUS

Extra metadata

Level in the ICD hierarchy 4
First used in FinnGen datafreeze DF2

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 947 511 427
Only index persons 754 416 338
Unadjusted period prevalence (%)
Whole population 0.01 0.01 0.01
Only index persons 0.01 0.02 0.01
Median age at first event (years)
Whole population 62.24 64.49 59.23
Only index persons 60.83 62.22 59.12

-FinnGen-

Key figures

All Female Male
Number of individuals 97 47 50
Unadjusted period prevalence (%) 0.02 0.02 0.03
Median age at first event (years) 56.65 50.67 62.27

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint L12_PEMPHIGUS_NAS and mortality.

Females

Parameter HR [95% CI] p-value
L12_PEMPHIGUS_NAS 1.776 [1.31, 2.42] < 0.001
Birth year 0.994 [0.99, 1.0] 0.151

During the follow-up period (1.1.1998 — 31.12.2019), 128 out of 395 females with L12_PEMPHIGUS_NAS died.

Males

Parameter HR [95% CI] p-value
L12_PEMPHIGUS_NAS 2.465 [1.66, 3.65] < 0.001
Birth year 0.987 [0.98, 1.0] 0.015

During the follow-up period (1.1.1998 — 31.12.2019), 119 out of 329 males with L12_PEMPHIGUS_NAS died.

Mortality risk

Mortality risk for people of age

years, who have L12_PEMPHIGUS_NAS.

N-year risk Females Males
1 0.127% 0.394%
5 0.996% 2.721%
10 2.44% 6.725%
15 4.76% 12.756%
20 7.928% 21.022%

Relationships between endpoints

Index endpoint: L12_PEMPHIGUS_NAS – Other and unspecified pemphigus

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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