Other infiltrative disorders of skin and subcutaneous tissue

L12_OTHERINFILTRATIVESKIN

skin disease: Any deviation from the normal structure or function of the skin or subcutaneous tissue that is manifested by a characteristic set of symptoms and signs.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L98.6
  • Cause of death: ICD-10 L98.6

2 out of 7 registries used, show all original rules.

154

4. Check minimum number of events

None

154

5. Include endpoints

None

154

6. Filter based on genotype QC (FinnGen only)

150

Control definitions (FinnGen only)

Control exclude L12_OTHERSKINSUBCUTIS

Extra metadata

Level in the ICD hierarchy 4
First used in FinnGen datafreeze DF2
Parent code in ICD-10 L98
Name in latin Aliae morbositates infiltrativae cutis et textus subcutanei

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 1124 634 485
Only index persons 1034 597 437
Unadjusted period prevalence (%)
Whole population 0.02 0.02 0.01
Only index persons 0.02 0.02 0.02
Median age at first event (years)
Whole population 55.18 56.99 52.63
Only index persons 55.43 57.00 53.29

-FinnGen-

Key figures

All Female Male
Number of individuals 150 93 57
Unadjusted period prevalence (%) 0.03 0.04 0.03
Median age at first event (years) 55.55 53.99 58.10

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint L12_OTHERINFILTRATIVESKIN and mortality.

Females

Parameter HR [95% CI] p-value
L12_OTHERINFILTRATIVESKIN 1.16 [0.89, 1.5] 0.264
Birth year 0.994 [0.99, 1.0] 0.159

During the follow-up period (1.1.1998 — 31.12.2019), 82 out of 583 females with L12_OTHERINFILTRATIVESKIN died.

Males

Parameter HR [95% CI] p-value
L12_OTHERINFILTRATIVESKIN 1.305 [0.99, 1.71] 0.055
Birth year 0.984 [0.97, 0.99] < 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 86 out of 442 males with L12_OTHERINFILTRATIVESKIN died.

Mortality risk

Mortality risk for people of age

years, who have L12_OTHERINFILTRATIVESKIN.

N-year risk Females Males
1 0.082% 0.224%
5 0.767% 1.307%
10 1.624% 3.239%
15 3.128% 6.275%
20 5.646% 10.793%

Relationships between endpoints

Index endpoint: L12_OTHERINFILTRATIVESKIN – Other infiltrative disorders of skin and subcutaneous tissue

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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