Autism spe

KRA_PSY_AUTISM_EXMORE

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

1. Apply sex-specific rule

None

-

2. Check conditions

None

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 F84.0, F84.5
  • Hospital discharge: ICD-9 2990
  • Cause of death: ICD-10 F84.0, F84.5
  • Cause of death: ICD-9 2990

2 out of 7 registries used, show all original rules.

-

4. Check minimum number of events

None

-

5. Include endpoints

None

-

6. Filter based on genotype QC (FinnGen only)

None

-

Control definitions (FinnGen only)

Control exclude KRA_PSY_ANYMENTAL

Extra metadata

First used in FinnGen datafreeze DF2

Case counts by codes

FinnGen case counts by registry codes:

No upset plot: script not run.

No upset table: script not run.

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 20159 5762 14375
Only index persons 17495 5180 12315
Unadjusted period prevalence (%)
Whole population 0.33 0.17 0.40
Only index persons 0.39 0.19 0.47
Median age at first event (years)
Whole population 12.63 15.83 11.31
Only index persons 13.67 16.33 12.55

-FinnGen-

Key figures

All Female Male
Number of individuals 767 350 417
Unadjusted period prevalence (%) 0.18 0.14 0.21
Median age at first event (years) 23.50 25.80 21.57

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint KRA_PSY_AUTISM_EXMORE and mortality.

Females

No data

Males

Parameter HR [95% CI] p-value
KRA_PSY_AUTISM_EXMORE 1.917 [1.57, 2.35] < 0.001
Birth year 0.984 [0.97, 0.99] < 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 134 out of 11396 males with KRA_PSY_AUTISM_EXMORE died.

Mortality risk

Mortality risk for people of age

years, who have KRA_PSY_AUTISM_EXMORE.

N-year risk Females Males
1 No data 0.377%
5 No data 2.083%
10 No data 5.188%
15 No data 9.556%
20 No data 15.657%

Relationships between endpoints

Index endpoint: KRA_PSY_AUTISM_EXMORE – Autism spe

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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