Diseases of pulp and periapical tissues

K11_PULP_PERIAPICAL

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 K04
  • Hospital discharge: ICD-9 522
  • Hospital discharge: ICD-8 522
  • Cause of death: ICD-10 K04
  • Cause of death: ICD-9 522
  • Cause of death: ICD-8 522

2 out of 7 registries used, show all original rules.

16002

4. Check minimum number of events

None

16002

5. Include endpoints

16002

6. Filter based on genotype QC (FinnGen only)

15235

Control definitions (FinnGen only)

Control exclude K11_ORAL

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF5

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 130540 58105 71265
Only index persons 119319 54293 65026
Unadjusted period prevalence (%)
Whole population 1.84 1.66 1.99
Only index persons 2.26 2.00 2.48
Median age at first event (years)
Whole population 47.28 47.78 47.03
Only index persons 47.71 48.22 47.29

-FinnGen-

Key figures

All Female Male
Number of individuals 15235 7686 7549
Unadjusted period prevalence (%) 3.40 3.02 3.79
Median age at first event (years) 54.73 52.46 57.04

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint K11_PULP_PERIAPICAL and mortality.

Females

Parameter HR [95% CI] p-value
K11_PULP_PERIAPICAL 2.176 [1.97, 2.41] < 0.001
Birth year 0.994 [0.99, 1.0] 0.14

During the follow-up period (1.1.1998 — 31.12.2019), 5543 out of 41677 females with K11_PULP_PERIAPICAL died.

Males

Parameter HR [95% CI] p-value
K11_PULP_PERIAPICAL 2.223 [2.0, 2.47] < 0.001
Birth year 0.986 [0.98, 1.0] 0.003

During the follow-up period (1.1.1998 — 31.12.2019), 9404 out of 48698 males with K11_PULP_PERIAPICAL died.

Mortality risk

Mortality risk for people of age

years, who have K11_PULP_PERIAPICAL.

N-year risk Females Males
1 0.183% 0.389%
5 1.238% 2.284%
10 2.993% 5.893%
15 5.855% 11.186%
20 10.223% 18.764%

Relationships between endpoints

Index endpoint: K11_PULP_PERIAPICAL – Diseases of pulp and periapical tissues

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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