Chronic periodontitis, complicated

K11_PERIODON_CHRON_COMPL

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 K05.31
  • Cause of death: ICD-10 K05.31

2 out of 7 registries used, show all original rules.

3216

4. Check minimum number of events

None

3216

5. Include endpoints

None

3216

6. Filter based on genotype QC (FinnGen only)

3010

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

First used in FinnGen datafreeze DF6

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 19988 8250 11538
Only index persons 18817 7946 10871
Unadjusted period prevalence (%)
Whole population 0.29 0.24 0.32
Only index persons 0.36 0.29 0.41
Median age at first event (years)
Whole population 60.66 60.71 60.85
Only index persons 60.69 60.61 60.76

-FinnGen-

Key figures

All Female Male
Number of individuals 3010 1248 1762
Unadjusted period prevalence (%) 0.72 0.49 0.88
Median age at first event (years) 61.70 59.96 62.94

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint K11_PERIODON_CHRON_COMPL and mortality.

Females

Parameter HR [95% CI] p-value
K11_PERIODON_CHRON_COMPL 3.04 [2.64, 3.51] < 0.001
Birth year 0.997 [0.99, 1.01] 0.502

During the follow-up period (1.1.1998 — 31.12.2019), 1517 out of 6616 females with K11_PERIODON_CHRON_COMPL died.

Males

Parameter HR [95% CI] p-value
K11_PERIODON_CHRON_COMPL 3.497 [3.06, 3.99] < 0.001
Birth year 0.987 [0.98, 1.0] 0.005

During the follow-up period (1.1.1998 — 31.12.2019), 2926 out of 9261 males with K11_PERIODON_CHRON_COMPL died.

Mortality risk

Mortality risk for people of age

years, who have K11_PERIODON_CHRON_COMPL.

N-year risk Females Males
1 0.374% 0.508%
5 1.811% 3.643%
10 4.625% 9.287%
15 8.65% 17.216%
20 15.042% 27.72%

Relationships between endpoints

Index endpoint: K11_PERIODON_CHRON_COMPL – Chronic periodontitis, complicated

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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