Periodontosis

K11_PERIODONTOSIS

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 K05.4
  • Hospital discharge: ICD-9 5235
  • Hospital discharge: ICD-8 5235
  • Cause of death: ICD-10 K05.4
  • Cause of death: ICD-9 5235
  • Cause of death: ICD-8 5235

2 out of 7 registries used, show all original rules.

59

4. Check minimum number of events

None

59

5. Include endpoints

None

59

6. Filter based on genotype QC (FinnGen only)

53

Control definitions (FinnGen only)

Control exclude K11_ORAL

Extra metadata

First used in FinnGen datafreeze DF5

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 624 303 307
Only index persons 534 275 259
Unadjusted period prevalence (%)
Whole population 0.01 0.01 0.01
Only index persons 0.01 0.01 0.01
Median age at first event (years)
Whole population 50.80 48.14 53.40
Only index persons 49.52 47.02 52.17

-FinnGen-

Key figures

All Female Male
Number of individuals 53 29 24
Unadjusted period prevalence (%) 0.01 0.01 0.01
Median age at first event (years) 56.12 52.02 61.06

-FinRegistry-

Age distribution of first events

010203040506070800102030405060708090100110120AgeIndividuals

-FinnGen-

Age distribution of first events

01030405060709002468101214AgeIndividuals

-FinRegistry-

Year distribution of first events

19701980199019952000200520102015202020220102030405060708090100110120130YearIndividuals

-FinnGen-

Year distribution of first events

19702000200520102015202302468101214YearIndividuals

-FinRegistry-

Cumulative Incidence Function

01020304050607080901000.00.10.20.30.40.50.60.70.80.91.0AgeProbability of first incidence (%)

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint K11_PERIODONTOSIS and mortality.

Females

No data

Males

Parameter HR [95% CI] p-value
K11_PERIODONTOSIS 2.631 [1.8, 3.85] < 0.001
Birth year 0.989 [0.98, 1.0] 0.072

During the follow-up period (1.1.1998 — 31.12.2019), 77 out of 239 males with K11_PERIODONTOSIS died.

Mortality risk

Mortality risk for people of age

years, who have K11_PERIODONTOSIS.

N-year risk Females Males
1 No data 0.494%
5 No data 2.946%
10 No data 7.188%
15 No data 14.082%
20 No data 22.837%

Relationships between endpoints

Index endpoint: K11_PERIODONTOSIS – Periodontosis

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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