All influenza

J10_INFLUENZA

influenza: An acute viral infection of the respiratory tract, occurring in isolated cases, in epidemics, or in pandemics; it is caused by serologically different strains of viruses (influenzaviruses) designated A, B, and C, has a 3-day incubation period, and usually lasts for 3 to 10 days. It is marked by inflammation of the nasal mucosa, pharynx, and conjunctiva; headache; myalgia; often fever, chills, and prostration; and occasionally involvement of the myocardium or central nervous system.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 J09, J10, J11
  • Hospital discharge: ICD-9 487
  • Hospital discharge: ICD-8 47[0-4]
  • Cause of death: ICD-10 J09, J10, J11
  • Cause of death: ICD-9 487
  • Cause of death: ICD-8 47[0-4]

2 out of 7 registries used, show all original rules.

10564

4. Check minimum number of events

None

10564

5. Include endpoints

None

10564

6. Filter based on genotype QC (FinnGen only)

10134

Control definitions (FinnGen only)

Control exclude J10_INFLUPNEU

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 126708 55538 70517
Only index persons 106944 46476 60468
Unadjusted period prevalence (%)
Whole population 1.80 1.59 1.97
Only index persons 2.05 1.71 2.31
Median age at first event (years)
Whole population 36.68 54.64 22.36
Only index persons 36.71 54.53 23.02

-FinnGen-

Key figures

All Female Male
Number of individuals 10134 4622 5512
Unadjusted period prevalence (%) 2.33 1.82 2.77
Median age at first event (years) 54.22 55.30 53.33

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint J10_INFLUENZA and mortality.

Females

Parameter HR [95% CI] p-value
J10_INFLUENZA 1.817 [1.58, 2.09] < 0.001
Birth year 0.992 [0.98, 1.0] 0.059

During the follow-up period (1.1.1998 — 31.12.2019), 7464 out of 39837 females with J10_INFLUENZA died.

Males

Parameter HR [95% CI] p-value
J10_INFLUENZA 2.08 [1.77, 2.45] < 0.001
Birth year 0.991 [0.98, 1.0] 0.042

During the follow-up period (1.1.1998 — 31.12.2019), 7353 out of 45296 males with J10_INFLUENZA died.

Mortality risk

Mortality risk for people of age

years, who have J10_INFLUENZA.

N-year risk Females Males
1 0.156% 0.399%
5 0.826% 2.446%
10 2.188% 6.453%
15 4.45% 12.412%
20 7.925% 19.88%

Relationships between endpoints

Index endpoint: J10_INFLUENZA – All influenza

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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