ILD related to systemic autoimmune disease

ILD_SYST_AUTO

interstitial lung disease: A diverse group of lung diseases that affect the lung parenchyma. They are characterized by an initial inflammation of pulmonary alveoli that extends to the interstitium and beyond leading to diffuse pulmonary fibrosis. Interstitial lung diseases are classified by their etiology (known or unknown causes), and radiological-pathological features.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

  • ILD_ELSEWHERE
149

3. Check pre-conditions, main-only, mode, registry filters

None

0 out of 7 registries used, show all original rules.

0

4. Check minimum number of events

None

0

5. Include endpoints

136

6. Filter based on genotype QC (FinnGen only)

132

Control definitions (FinnGen only)

Control exclude ILD_ENDPOINTS
Control conditions not ILD_ELSEWHERE

Extra metadata

First used in FinnGen datafreeze DF2

Case counts by codes

FinnGen case counts by registry codes:

No data for upset plot.

No data for upset table.

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 702 418 283
Only index persons 570 342 228
Unadjusted period prevalence (%)
Whole population 0.01 0.01 0.01
Only index persons 0.01 0.01 0.01
Median age at first event (years)
Whole population 65.09 64.63 65.84
Only index persons 64.33 63.09 66.19

-FinnGen-

Key figures

All Female Male
Number of individuals 132 75 57
Unadjusted period prevalence (%) 0.03 0.03 0.03
Median age at first event (years) 60.34 57.42 64.19

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint ILD_SYST_AUTO and mortality.

Females

Parameter HR [95% CI] p-value
ILD_SYST_AUTO 3.699 [2.83, 4.84] < 0.001
Birth year 0.993 [0.98, 1.0] 0.096

During the follow-up period (1.1.1998 — 31.12.2019), 137 out of 320 females with ILD_SYST_AUTO died.

Males

Parameter HR [95% CI] p-value
ILD_SYST_AUTO 3.464 [2.4, 5.01] < 0.001
Birth year 0.987 [0.98, 1.0] 0.006

During the follow-up period (1.1.1998 — 31.12.2019), 108 out of 205 males with ILD_SYST_AUTO died.

Mortality risk

Mortality risk for people of age

years, who have ILD_SYST_AUTO.

N-year risk Females Males
1 0.408% 0.714%
5 1.999% 4.234%
10 4.769% 9.531%
15 9.366% 17.667%
20 16.266% 28.289%

Relationships between endpoints

Index endpoint: ILD_SYST_AUTO – ILD related to systemic autoimmune disease

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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