Carcinoid syndrome

E4_CARCISDR

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 E34.0
  • Hospital discharge: ICD-9 2592
  • Cause of death: ICD-10 E34.0
  • Cause of death: ICD-9 2592

2 out of 7 registries used, show all original rules.

292

4. Check minimum number of events

None

292

5. Include endpoints

None

292

6. Filter based on genotype QC (FinnGen only)

279

Control definitions (FinnGen only)

Control exclude E4_ENDOGLAND

Extra metadata

Level in the ICD hierarchy 4
First used in FinnGen datafreeze DF2
Parent code in ICD-10 E34
Name in latin Syndroma carcinoides

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 1609 854 744
Only index persons 1230 666 564
Unadjusted period prevalence (%)
Whole population 0.02 0.02 0.02
Only index persons 0.02 0.02 0.02
Median age at first event (years)
Whole population 64.12 63.82 64.35
Only index persons 62.75 62.30 63.27

-FinnGen-

Key figures

All Female Male
Number of individuals 279 133 146
Unadjusted period prevalence (%) 0.06 0.05 0.07
Median age at first event (years) 61.85 60.02 63.52

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint E4_CARCISDR and mortality.

Females

Parameter HR [95% CI] p-value
E4_CARCISDR 4.015 [3.24, 4.98] < 0.001
Birth year 0.993 [0.98, 1.0] 0.136

During the follow-up period (1.1.1998 — 31.12.2019), 304 out of 704 females with E4_CARCISDR died.

Males

Parameter HR [95% CI] p-value
E4_CARCISDR 3.911 [3.06, 4.99] < 0.001
Birth year 0.989 [0.98, 1.0] 0.034

During the follow-up period (1.1.1998 — 31.12.2019), 305 out of 623 males with E4_CARCISDR died.

Mortality risk

Mortality risk for people of age

years, who have E4_CARCISDR.

N-year risk Females Males
1 0.313% 0.692%
5 2.093% 4.777%
10 5.068% 11.321%
15 9.75% 20.778%
20 16.571% 33.927%

Relationships between endpoints

Index endpoint: E4_CARCISDR – Carcinoid syndrome

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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