Chronic hepatitis NAS

CHRONHEP_NAS

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

2 out of 7 registries used, show all original rules.

423

4. Check minimum number of events

None

423

5. Include endpoints

None

423

6. Filter based on genotype QC (FinnGen only)

408

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

First used in FinnGen datafreeze DF2

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 3280 1919 1341
Only index persons 2815 1703 1112
Unadjusted period prevalence (%)
Whole population 0.05 0.05 0.04
Only index persons 0.05 0.06 0.04
Median age at first event (years)
Whole population 55.85 57.41 53.52
Only index persons 54.73 56.41 52.15

-FinnGen-

Key figures

All Female Male
Number of individuals 408 266 142
Unadjusted period prevalence (%) 0.09 0.10 0.07
Median age at first event (years) 53.26 52.85 54.01

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint CHRONHEP_NAS and mortality.

Females

Parameter HR [95% CI] p-value
CHRONHEP_NAS 2.925 [2.5, 3.42] < 0.001
Birth year 0.991 [0.98, 1.0] 0.054

During the follow-up period (1.1.1998 — 31.12.2019), 507 out of 1704 females with CHRONHEP_NAS died.

Males

Parameter HR [95% CI] p-value
CHRONHEP_NAS 3.58 [2.98, 4.31] < 0.001
Birth year 0.987 [0.98, 1.0] 0.008

During the follow-up period (1.1.1998 — 31.12.2019), 430 out of 1151 males with CHRONHEP_NAS died.

Mortality risk

Mortality risk for people of age

years, who have CHRONHEP_NAS.

N-year risk Females Males
1 0.192% 0.504%
5 1.625% 3.958%
10 3.561% 9.484%
15 6.913% 18.168%
20 12.624% 29.866%

Relationships between endpoints

Index endpoint: CHRONHEP_NAS – Chronic hepatitis NAS

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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