Alcohol-induced acute pancreatitis

ALCOPANCACU

alcoholic pancreatitis: Acute or chronic inflammation of the pancreas due to excessive alcohol drinking. Alcoholic pancreatitis usually presents as an acute episode but it is a chronic progressive disease in alcoholics.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 K85.2
  • Hospital discharge: ICD-9 5770D|5770E
  • Cause of death: ICD-10 K85.2
  • Cause of death: ICD-9 5770D|5770E

2 out of 7 registries used, show all original rules.

1168

4. Check minimum number of events

None

1168

5. Include endpoints

None

1168

6. Filter based on genotype QC (FinnGen only)

1144

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy 2
First used in FinnGen datafreeze DF2
Parent code in ICD-10 K85

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 13938 2274 11487
Only index persons 9836 1787 8049
Unadjusted period prevalence (%)
Whole population 0.28 0.07 0.32
Only index persons 0.26 0.07 0.31
Median age at first event (years)
Whole population 45.74 48.04 45.21
Only index persons 46.50 48.71 46.01

-FinnGen-

Key figures

All Female Male
Number of individuals 1144 208 936
Unadjusted period prevalence (%) 0.40 0.08 0.47
Median age at first event (years) 48.71 48.47 48.76

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint ALCOPANCACU and mortality.

Females

Parameter HR [95% CI] p-value
ALCOPANCACU 4.5 [2.55, 7.94] < 0.001
Birth year 0.994 [0.99, 1.0] 0.196

During the follow-up period (1.1.1998 — 31.12.2019), 91 out of 815 females with ALCOPANCACU died.

Males

Parameter HR [95% CI] p-value
ALCOPANCACU 3.965 [3.18, 4.95] < 0.001
Birth year 0.987 [0.98, 1.0] 0.007

During the follow-up period (1.1.1998 — 31.12.2019), 456 out of 3511 males with ALCOPANCACU died.

Mortality risk

Mortality risk for people of age

years, who have ALCOPANCACU.

N-year risk Females Males
1 0.291% 0.681%
5 3.029% 4.904%
10 6.421% 12.006%
15 12.055% 21.085%
20 20.524% 33.046%

Relationships between endpoints

Index endpoint: ALCOPANCACU – Alcohol-induced acute pancreatitis

GWS hits: 3

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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