Toxic effect of ethanol

ST19_TOXIC_EFFECT_ETHAN

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 T51.0
  • Hospital discharge: ICD-9 9800
  • Hospital discharge: ICD-8 9800
  • Cause of death: ICD-10 T51.0
  • Cause of death: ICD-9 9800
  • Cause of death: ICD-8 9800

2 out of 7 registries used, show all original rules.

1512

4. Check minimum number of events

None

1512

5. Include endpoints

None

1512

6. Filter based on genotype QC (FinnGen only)

1454

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy 4
Special ALCOETHTOXIC
First used in FinnGen datafreeze DF4
Parent code in ICD-10 T51
Name in latin Effectus toxicus alcohol aethylici

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 23765 8683 14891
Only index persons 19385 7778 11607
Unadjusted period prevalence (%)
Whole population 0.35 0.25 0.42
Only index persons 0.38 0.29 0.44
Median age at first event (years)
Whole population 21.51 15.84 24.50
Only index persons 17.62 15.58 18.98

-FinnGen-

Key figures

All Female Male
Number of individuals 1454 664 790
Unadjusted period prevalence (%) 0.33 0.26 0.40
Median age at first event (years) 23.32 16.16 29.34

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint ST19_TOXIC_EFFECT_ETHAN and mortality.

Females

Parameter HR [95% CI] p-value
ST19_TOXIC_EFFECT_ETHAN 5.261 [4.21, 6.57] < 0.001
Birth year 1.0 [0.99, 1.01] 0.899

During the follow-up period (1.1.1998 — 31.12.2019), 320 out of 4850 females with ST19_TOXIC_EFFECT_ETHAN died.

Males

Parameter HR [95% CI] p-value
ST19_TOXIC_EFFECT_ETHAN 5.615 [4.99, 6.32] < 0.001
Birth year 0.985 [0.98, 0.99] 0.002

During the follow-up period (1.1.1998 — 31.12.2019), 1168 out of 6850 males with ST19_TOXIC_EFFECT_ETHAN died.

Mortality risk

Mortality risk for people of age

years, who have ST19_TOXIC_EFFECT_ETHAN.

N-year risk Females Males
1 0.708% 1.109%
5 3.474% 6.285%
10 7.41% 14.344%
15 13.925% 25.662%
20 25.639% 39.088%

Relationships between endpoints

Index endpoint: ST19_TOXIC_EFFECT_ETHAN – Toxic effect of ethanol

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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