Acute tubulo-interstitial nephritis

N14_PYELONEPHR

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 N10
  • Hospital discharge: ICD-9 5901
  • Hospital discharge: ICD-8 5901
  • Cause of death: ICD-10 N10
  • Cause of death: ICD-9 5901
  • Cause of death: ICD-8 5901

2 out of 7 registries used, show all original rules.

30721

4. Check minimum number of events

None

30721

5. Include endpoints

None

30721

6. Filter based on genotype QC (FinnGen only)

29521

Control definitions (FinnGen only)

Control exclude N14_RENALTUB

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 N10-N16
Name in latin Nephritis tubulo-interstitialis acuta

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 357461 241013 113711
Only index persons 286822 194611 92211
Unadjusted period prevalence (%)
Whole population 5.69 6.90 3.18
Only index persons 5.99 7.15 3.52
Median age at first event (years)
Whole population 66.24 64.40 70.10
Only index persons 63.65 60.89 69.47

-FinnGen-

Key figures

All Female Male
Number of individuals 29521 18357 11164
Unadjusted period prevalence (%) 6.60 7.21 5.61
Median age at first event (years) 59.08 52.08 70.59

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint N14_PYELONEPHR and mortality.

Females

Parameter HR [95% CI] p-value
N14_PYELONEPHR 2.358 [2.14, 2.6] < 0.001
Birth year 0.99 [0.98, 1.0] 0.009

During the follow-up period (1.1.1998 — 31.12.2019), 59088 out of 154909 females with N14_PYELONEPHR died.

Males

Parameter HR [95% CI] p-value
N14_PYELONEPHR 2.465 [2.19, 2.77] < 0.001
Birth year 0.984 [0.98, 0.99] < 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 35641 out of 80778 males with N14_PYELONEPHR died.

Mortality risk

Mortality risk for people of age

years, who have N14_PYELONEPHR.

N-year risk Females Males
1 0.165% 0.374%
5 1.119% 2.321%
10 2.551% 5.742%
15 4.663% 10.466%
20 8.16% 17.159%

Relationships between endpoints

Index endpoint: N14_PYELONEPHR – Acute tubulo-interstitial nephritis

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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