Cyst of Bartholin Gland

N14_BARTHOCYS

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

only females

265735

2. Check conditions

None

265735

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 N75.0
  • Hospital discharge: ICD-9 6162A
  • Cause of death: ICD-10 N75.0
  • Cause of death: ICD-9 6162A

2 out of 7 registries used, show all original rules.

1352

4. Check minimum number of events

None

1352

5. Include endpoints

None

1352

6. Filter based on genotype QC (FinnGen only)

1297

Control definitions (FinnGen only)

Control exclude N14_FEMALEGENINF

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 N75
Name in latin Cysta glandulae vestibularis majoris (Bartholini)

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 9428 9428 -
Only index persons 9229 9229 -
Unadjusted period prevalence (%)
Whole population 0.27 0.27 -
Only index persons 0.34 0.34 -
Median age at first event (years)
Whole population - 39.12 -
Only index persons - 38.91 -

-FinnGen-

Key figures

All Female Male
Number of individuals 1297 1297 -
Unadjusted period prevalence (%) 0.51 0.51 -
Median age at first event (years) 40.20 40.20 -

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint N14_BARTHOCYS and mortality.

Females

Parameter HR [95% CI] p-value
N14_BARTHOCYS 0.911 [0.78, 1.06] 0.228
Birth year 0.997 [0.99, 1.01] 0.514

During the follow-up period (1.1.1998 — 31.12.2019), 271 out of 6518 females with N14_BARTHOCYS died.

Males

No data

Mortality risk

Mortality risk for people of age

years, who have N14_BARTHOCYS.

N-year risk Females Males
1 0.088% No data
5 0.474% No data
10 1.323% No data
15 2.564% No data
20 4.899% No data

Relationships between endpoints

Index endpoint: N14_BARTHOCYS – Cyst of Bartholin Gland

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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