Seborrhoeic keratosis

L12_SEBORRKERAT

dermatosis papulosa nigra: a condition of many small, benign skin lesions on the face, a condition generally presenting on dark-skinned individuals.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L82
  • Cause of death: ICD-10 L82

2 out of 7 registries used, show all original rules.

8082

4. Check minimum number of events

None

8082

5. Include endpoints

None

8082

6. Filter based on genotype QC (FinnGen only)

7835

Control definitions (FinnGen only)

Control exclude L12_OTHERSKINSUBCUTIS

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 L80-L99
Name in latin Keratosis seborrhoica

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 49790 30039 19626
Only index persons 48277 29332 18945
Unadjusted period prevalence (%)
Whole population 0.74 0.86 0.55
Only index persons 0.94 1.08 0.72
Median age at first event (years)
Whole population 68.02 67.80 68.34
Only index persons 67.81 67.58 68.15

-FinnGen-

Key figures

All Female Male
Number of individuals 7835 4583 3252
Unadjusted period prevalence (%) 1.73 1.80 1.63
Median age at first event (years) 66.99 65.39 69.25

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint L12_SEBORRKERAT and mortality.

Females

Parameter HR [95% CI] p-value
L12_SEBORRKERAT 0.877 [0.8, 0.96] 0.004
Birth year 0.991 [0.98, 1.0] 0.026

During the follow-up period (1.1.1998 — 31.12.2019), 4512 out of 21592 females with L12_SEBORRKERAT died.

Males

Parameter HR [95% CI] p-value
L12_SEBORRKERAT 0.905 [0.82, 1.0] 0.058
Birth year 0.988 [0.98, 1.0] 0.009

During the follow-up period (1.1.1998 — 31.12.2019), 3733 out of 14750 males with L12_SEBORRKERAT died.

Mortality risk

Mortality risk for people of age

years, who have L12_SEBORRKERAT.

N-year risk Females Males
1 0.067% 0.192%
5 0.425% 0.993%
10 1.095% 2.52%
15 2.198% 5.123%
20 3.916% 8.665%

Relationships between endpoints

Index endpoint: L12_SEBORRKERAT – Seborrhoeic keratosis

GWS hits: 7

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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