Acute lymphadenitis

L12_LYMPHADENITIS

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L04
  • Hospital discharge: ICD-9 683
  • Hospital discharge: ICD-8 683
  • Cause of death: ICD-10 L04
  • Cause of death: ICD-9 683
  • Cause of death: ICD-8 683

2 out of 7 registries used, show all original rules.

2288

4. Check minimum number of events

None

2288

5. Include endpoints

None

2288

6. Filter based on genotype QC (FinnGen only)

2206

Control definitions (FinnGen only)

Control exclude L12_INFECT_SKIN

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 L00-L08
Name in latin Lymphadenitis acuta

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 27936 12727 15117
Only index persons 24318 11304 13014
Unadjusted period prevalence (%)
Whole population 0.39 0.36 0.42
Only index persons 0.46 0.42 0.50
Median age at first event (years)
Whole population 18.02 22.26 14.28
Only index persons 18.72 22.85 15.14

-FinnGen-

Key figures

All Female Male
Number of individuals 2206 1299 907
Unadjusted period prevalence (%) 0.49 0.51 0.46
Median age at first event (years) 28.86 29.38 28.12

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint L12_LYMPHADENITIS and mortality.

Females

Parameter HR [95% CI] p-value
L12_LYMPHADENITIS 1.573 [1.39, 1.78] < 0.001
Birth year 1.0 [0.99, 1.01] 0.956

During the follow-up period (1.1.1998 — 31.12.2019), 671 out of 8609 females with L12_LYMPHADENITIS died.

Males

Parameter HR [95% CI] p-value
L12_LYMPHADENITIS 1.915 [1.68, 2.19] < 0.001
Birth year 0.982 [0.97, 0.99] < 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 847 out of 9296 males with L12_LYMPHADENITIS died.

Mortality risk

Mortality risk for people of age

years, who have L12_LYMPHADENITIS.

N-year risk Females Males
1 0.179% 0.322%
5 1.175% 1.864%
10 2.562% 4.926%
15 5.328% 9.104%
20 9.277% 15.178%

Relationships between endpoints

Index endpoint: L12_LYMPHADENITIS – Acute lymphadenitis

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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