Cysts of oral region, not elsewhere classified

K11_ORALCYST

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 K09
  • Hospital discharge: ICD-9 5260
  • Hospital discharge: ICD-8 5260
  • Cause of death: ICD-10 K09
  • Cause of death: ICD-9 5260
  • Cause of death: ICD-8 5260

2 out of 7 registries used, show all original rules.

1573

4. Check minimum number of events

None

1573

5. Include endpoints

None

1573

6. Filter based on genotype QC (FinnGen only)

1522

Control definitions (FinnGen only)

Control exclude K11_ORAL

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF5

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 13659 5706 7899
Only index persons 12922 5483 7439
Unadjusted period prevalence (%)
Whole population 0.20 0.16 0.22
Only index persons 0.25 0.20 0.28
Median age at first event (years)
Whole population 47.71 48.23 47.37
Only index persons 47.53 48.20 47.03

-FinnGen-

Key figures

All Female Male
Number of individuals 1522 665 857
Unadjusted period prevalence (%) 0.36 0.26 0.43
Median age at first event (years) 53.39 51.29 55.02

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint K11_ORALCYST and mortality.

Females

Parameter HR [95% CI] p-value
K11_ORALCYST 1.033 [0.91, 1.17] 0.615
Birth year 0.995 [0.99, 1.0] 0.232

During the follow-up period (1.1.1998 — 31.12.2019), 424 out of 4486 females with K11_ORALCYST died.

Males

Parameter HR [95% CI] p-value
K11_ORALCYST 1.224 [1.09, 1.38] < 0.001
Birth year 0.988 [0.98, 1.0] 0.009

During the follow-up period (1.1.1998 — 31.12.2019), 795 out of 6006 males with K11_ORALCYST died.

Mortality risk

Mortality risk for people of age

years, who have K11_ORALCYST.

N-year risk Females Males
1 0.11% 0.238%
5 0.651% 1.432%
10 1.674% 3.609%
15 3.19% 6.928%
20 5.373% 11.139%

Relationships between endpoints

Index endpoint: K11_ORALCYST – Cysts of oral region, not elsewhere classified

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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