Parkinson's disease

G6_PARKINSON

Parkinson's disease: A progressive degenerative disorder of the central nervous system characterized by loss of dopamine producing neurons in the substantia nigra and the presence of Lewy bodies in the substantia nigra and locus coeruleus. Signs and symptoms include tremor which is most pronounced during rest, muscle rigidity, slowing of the voluntary movements, a tendency to fall back, and a mask-like facial expression.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 G20
  • Hospital discharge: ICD-9 3320A
  • Hospital discharge: ICD-8 34200
  • Cause of death: ICD-10 G20
  • Cause of death: ICD-9 3320A
  • Cause of death: ICD-8 34200
  • KELA reimbursements: KELA codes 110

3 out of 7 registries used, show all original rules.

5309

4. Check minimum number of events

None

5309

5. Include endpoints

None

5309

6. Filter based on genotype QC (FinnGen only)

5150

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 G20-G26
Name in latin Morbus Parkinson

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 65870 29924 34815
Only index persons 43747 19998 23749
Unadjusted period prevalence (%)
Whole population 0.92 0.86 0.97
Only index persons 0.83 0.74 0.91
Median age at first event (years)
Whole population 71.52 72.00 71.11
Only index persons 71.27 71.90 70.73

-FinnGen-

Key figures

All Female Male
Number of individuals 5150 2053 3097
Unadjusted period prevalence (%) 1.26 0.81 1.56
Median age at first event (years) 69.01 67.54 69.98

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint G6_PARKINSON and mortality.

Females

Parameter HR [95% CI] p-value
G6_PARKINSON 2.269 [2.1, 2.45] < 0.001
Birth year 0.996 [0.99, 1.0] 0.325

During the follow-up period (1.1.1998 — 31.12.2019), 9442 out of 18382 females with G6_PARKINSON died.

Males

Parameter HR [95% CI] p-value
G6_PARKINSON 2.162 [1.96, 2.38] < 0.001
Birth year 0.988 [0.98, 1.0] 0.006

During the follow-up period (1.1.1998 — 31.12.2019), 11970 out of 22585 males with G6_PARKINSON died.

Mortality risk

Mortality risk for people of age

years, who have G6_PARKINSON.

N-year risk Females Males
1 0.163% 0.462%
5 1.349% 2.815%
10 3.481% 6.134%
15 6.402% 11.465%
20 11.11% 19.01%

Relationships between endpoints

Index endpoint: G6_PARKINSON – Parkinson's disease

GWS hits: 5

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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