Hydrocephalus in other diseases

G6_HCINOTH

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

2 out of 7 registries used, show all original rules.

174

4. Check minimum number of events

None

174

5. Include endpoints

None

174

6. Filter based on genotype QC (FinnGen only)

170

Control definitions (FinnGen only)

Control exclude G6_HYDROCEPH

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 1769 924 839
Only index persons 1488 795 693
Unadjusted period prevalence (%)
Whole population 0.02 0.03 0.02
Only index persons 0.03 0.03 0.03
Median age at first event (years)
Whole population 56.83 58.92 54.41
Only index persons 57.38 58.88 55.66

-FinnGen-

Key figures

All Female Male
Number of individuals 170 108 62
Unadjusted period prevalence (%) 0.04 0.04 0.03
Median age at first event (years) 59.80 59.20 60.84

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint G6_HCINOTH and mortality.

Females

Parameter HR [95% CI] p-value
G6_HCINOTH 5.144 [3.85, 6.87] < 0.001
Birth year 0.992 [0.98, 1.0] 0.055

During the follow-up period (1.1.1998 — 31.12.2019), 238 out of 716 females with G6_HCINOTH died.

Males

Parameter HR [95% CI] p-value
G6_HCINOTH 5.443 [3.94, 7.52] < 0.001
Birth year 0.989 [0.98, 1.0] 0.055

During the follow-up period (1.1.1998 — 31.12.2019), 203 out of 639 males with G6_HCINOTH died.

Mortality risk

Mortality risk for people of age

years, who have G6_HCINOTH.

N-year risk Females Males
1 0.386% 0.987%
5 3.0% 6.198%
10 6.745% 15.626%
15 12.709% 27.03%
20 20.651% 42.374%

Relationships between endpoints

Index endpoint: G6_HCINOTH – Hydrocephalus in other diseases

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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