Communicating hydrocephalus

G6_HCCOMM

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 G91.0
  • Hospital discharge: ICD-9 3313
  • Cause of death: ICD-10 G91.0
  • Cause of death: ICD-9 3313

2 out of 7 registries used, show all original rules.

696

4. Check minimum number of events

None

696

5. Include endpoints

None

696

6. Filter based on genotype QC (FinnGen only)

679

Control definitions (FinnGen only)

Control exclude G6_HYDROCEPH

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 G91
Name in latin Hydrocephalia communicans

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 6750 3351 3305
Only index persons 4677 2460 2217
Unadjusted period prevalence (%)
Whole population 0.09 0.10 0.09
Only index persons 0.09 0.09 0.08
Median age at first event (years)
Whole population 59.21 61.43 56.68
Only index persons 55.27 58.24 51.98

-FinnGen-

Key figures

All Female Male
Number of individuals 679 348 331
Unadjusted period prevalence (%) 0.15 0.14 0.17
Median age at first event (years) 59.89 59.57 60.22

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint G6_HCCOMM and mortality.

Females

Parameter HR [95% CI] p-value
G6_HCCOMM 3.207 [2.83, 3.63] < 0.001
Birth year 0.997 [0.99, 1.01] 0.446

During the follow-up period (1.1.1998 — 31.12.2019), 862 out of 2207 females with G6_HCCOMM died.

Males

Parameter HR [95% CI] p-value
G6_HCCOMM 3.268 [2.82, 3.79] < 0.001
Birth year 0.988 [0.98, 1.0] 0.014

During the follow-up period (1.1.1998 — 31.12.2019), 835 out of 2089 males with G6_HCCOMM died.

Mortality risk

Mortality risk for people of age

years, who have G6_HCCOMM.

N-year risk Females Males
1 0.237% 0.734%
5 1.673% 3.6%
10 4.418% 9.74%
15 9.011% 17.976%
20 15.437% 29.439%

Relationships between endpoints

Index endpoint: G6_HCCOMM – Communicating hydrocephalus

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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