Motor neuron disease

G6_ALS

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 G12.2
  • Hospital discharge: ICD-9 3352A
  • Hospital discharge: ICD-8 348[0-1]|34821
  • Cause of death: ICD-10 G12.2
  • Cause of death: ICD-9 3352A
  • Cause of death: ICD-8 348[0-1]|34821

2 out of 7 registries used, show all original rules.

603

4. Check minimum number of events

None

603

5. Include endpoints

None

603

6. Filter based on genotype QC (FinnGen only)

591

Control definitions (FinnGen only)

Control exclude F5_PSYCH, NEURODIS

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 G12
Name in latin Morbus motoneuronalis

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 8362 3928 4249
Only index persons 4490 2114 2376
Unadjusted period prevalence (%)
Whole population 0.12 0.11 0.12
Only index persons 0.08 0.08 0.09
Median age at first event (years)
Whole population 66.30 67.33 65.35
Only index persons 67.14 68.36 66.06

-FinnGen-

Key figures

All Female Male
Number of individuals 591 240 351
Unadjusted period prevalence (%) 0.14 0.09 0.18
Median age at first event (years) 67.39 67.44 67.35

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint G6_ALS and mortality.

Females

Parameter HR [95% CI] p-value
G6_ALS 18.515 [14.27, 24.02] < 0.001
Birth year 0.996 [0.99, 1.0] 0.318

During the follow-up period (1.1.1998 — 31.12.2019), 2037 out of 2507 females with G6_ALS died.

Males

Parameter HR [95% CI] p-value
G6_ALS 9.357 [7.48, 11.7] < 0.001
Birth year 0.991 [0.98, 1.0] 0.04

During the follow-up period (1.1.1998 — 31.12.2019), 1983 out of 2612 males with G6_ALS died.

Mortality risk

Mortality risk for people of age

years, who have G6_ALS.

N-year risk Females Males
1 1.608% 1.809%
5 9.35% 11.766%
10 22.668% 26.493%
15 41.38% 44.597%
20 62.462% 65.032%

Relationships between endpoints

Index endpoint: G6_ALS – Motor neuron disease

GWS hits: 4

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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