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This is a non-core endpoint: only basic statistics are computed.

See these related core endpoints for full statistics:

Disorders of glycine metabolism

E4_GLYCINE

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 E72.5
  • Cause of death: ICD-10 E72.5

2 out of 7 registries used, show all original rules.

20

4. Check minimum number of events

None

20

5. Include endpoints

None

20

6. Filter based on genotype QC (FinnGen only)

20

Control definitions (FinnGen only)

Control exclude E4_METABOLIA

Extra metadata

Level in the ICD hierarchy 4
First used in FinnGen datafreeze DF2
Parent code in ICD-10 E72
Name in latin Perturbationes metabolismi glycini

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 263 130 130
Only index persons 194 97 97
Unadjusted period prevalence (%)
Whole population 0.00 0.00 0.00
Only index persons 0.00 0.00 0.00
Median age at first event (years)
Whole population 61.96 65.93 57.54
Only index persons 64.29 65.93 62.66

-FinnGen-

Key figures

All Female Male
Number of individuals 20 13 7
Unadjusted period prevalence (%) 0.00 0.01 0.00
Median age at first event (years) 51.72 42.43 68.96

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

No data

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

Mortality – FinRegistry

Association

Association between endpoint E4_GLYCINE and mortality.

Females

Parameter HR [95% CI] p-value
E4_GLYCINE 2.408 [1.48, 3.92] < 0.001
Birth year 0.992 [0.98, 1.0] 0.069

During the follow-up period (1.1.1998 — 31.12.2019), 53 out of 112 females with E4_GLYCINE died.

Males

No data

Mortality risk

Mortality risk for people of age

years, who have E4_GLYCINE.

N-year risk Females Males
1 0.193% No data
5 1.165% No data
10 2.922% No data
15 5.614% No data
20 10.372% No data

Relationships between endpoints

Index endpoint: E4_GLYCINE – Disorders of glycine metabolism

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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