Other disorders of amino-acid metabolism

E4_AMINO

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 E72
  • Cause of death: ICD-10 E72

2 out of 7 registries used, show all original rules.

138

4. Check minimum number of events

None

138

5. Include endpoints

157

6. Filter based on genotype QC (FinnGen only)

152

Control definitions (FinnGen only)

Control exclude E4_METABOLIA

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 E70-E90
Name in latin Aliae perturbationes metabolismi acidorum aminoicorum

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 1745 846 887
Only index persons 1331 659 672
Unadjusted period prevalence (%)
Whole population 0.02 0.02 0.02
Only index persons 0.02 0.02 0.03
Median age at first event (years)
Whole population 52.90 55.02 50.64
Only index persons 53.93 55.81 52.09

-FinnGen-

Key figures

All Female Male
Number of individuals 152 79 73
Unadjusted period prevalence (%) 0.03 0.03 0.04
Median age at first event (years) 52.09 46.94 57.66

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint E4_AMINO and mortality.

Females

Parameter HR [95% CI] p-value
E4_AMINO 2.512 [1.93, 3.26] < 0.001
Birth year 0.993 [0.98, 1.0] 0.091

During the follow-up period (1.1.1998 — 31.12.2019), 205 out of 578 females with E4_AMINO died.

Males

Parameter HR [95% CI] p-value
E4_AMINO 3.747 [2.76, 5.09] < 0.001
Birth year 0.986 [0.98, 1.0] 0.005

During the follow-up period (1.1.1998 — 31.12.2019), 230 out of 601 males with E4_AMINO died.

Mortality risk

Mortality risk for people of age

years, who have E4_AMINO.

N-year risk Females Males
1 0.268% 0.683%
5 1.525% 4.062%
10 3.659% 10.004%
15 6.716% 18.481%
20 11.084% 29.844%

Relationships between endpoints

Index endpoint: E4_AMINO – Other disorders of amino-acid metabolism

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
loading spinner Loading data