Melanocytic naevi of other and unspecified parts of face

CD2_BENIGN_MELANOCYTIC_FACE

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 D22.3&
  • Hospital discharge: ICD-9 2163A
  • Cause of death: ICD-10 D22.3&
  • Cause of death: ICD-9 2163A

2 out of 7 registries used, show all original rules.

2068

4. Check minimum number of events

None

2068

5. Include endpoints

None

2068

6. Filter based on genotype QC (FinnGen only)

1995

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 D22
Name in latin Naevus melanocyticus (cutis) faciei

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 16215 10654 5504
Only index persons 15389 10225 5164
Unadjusted period prevalence (%)
Whole population 0.25 0.31 0.15
Only index persons 0.32 0.38 0.20
Median age at first event (years)
Whole population 44.36 44.13 44.75
Only index persons 44.23 43.97 44.75

-FinnGen-

Key figures

All Female Male
Number of individuals 1995 1400 595
Unadjusted period prevalence (%) 0.47 0.55 0.30
Median age at first event (years) 48.62 45.22 56.63

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint CD2_BENIGN_MELANOCYTIC_FACE and mortality.

Females

Parameter HR [95% CI] p-value
CD2_BENIGN_MELANOCYTIC_FACE 0.859 [0.77, 0.96] 0.009
Birth year 0.997 [0.99, 1.01] 0.513

During the follow-up period (1.1.1998 — 31.12.2019), 755 out of 8978 females with CD2_BENIGN_MELANOCYTIC_FACE died.

Males

Parameter HR [95% CI] p-value
CD2_BENIGN_MELANOCYTIC_FACE 0.856 [0.76, 0.97] 0.013
Birth year 0.993 [0.98, 1.0] 0.108

During the follow-up period (1.1.1998 — 31.12.2019), 590 out of 4616 males with CD2_BENIGN_MELANOCYTIC_FACE died.

Mortality risk

Mortality risk for people of age

years, who have CD2_BENIGN_MELANOCYTIC_FACE.

N-year risk Females Males
1 0.072% 0.191%
5 0.436% 1.109%
10 1.176% 2.921%
15 2.395% 5.773%
20 4.597% 9.912%

Relationships between endpoints

Index endpoint: CD2_BENIGN_MELANOCYTIC_FACE – Melanocytic naevi of other and unspecified parts of face

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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