Benign neoplasm: Descending colon

CD2_BENIGN_DESCENDING_COLON

colonic neoplasm: A benign or malignant neoplasm that affects the colon. Representative examples of benign neoplasms include lipoma and leiomyoma. Representative examples of malignant neoplasms include carcinoma, lymphoma, and sarcoma. Colonic adenomas always exhibit epithelial dysplasia and are considered premalignant neoplasms.

Suggest a new description

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 D12.4&
  • Hospital discharge: ICD-8 21135
  • Cause of death: ICD-10 D12.4&
  • Cause of death: ICD-8 21135

2 out of 7 registries used, show all original rules.

2045

4. Check minimum number of events

None

2045

5. Include endpoints

None

2045

6. Filter based on genotype QC (FinnGen only)

1958

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy 4
First used in FinnGen datafreeze DF2
Parent code in ICD-10 D12
Name in latin Neoplasma benignum coli descendentis

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 11433 5068 6323
Only index persons 10736 4845 5891
Unadjusted period prevalence (%)
Whole population 0.16 0.15 0.18
Only index persons 0.20 0.18 0.22
Median age at first event (years)
Whole population 67.11 67.05 67.17
Only index persons 66.90 66.85 66.95

-FinnGen-

Key figures

All Female Male
Number of individuals 1958 882 1076
Unadjusted period prevalence (%) 0.45 0.35 0.54
Median age at first event (years) 66.81 65.51 67.88

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint CD2_BENIGN_DESCENDING_COLON and mortality.

Females

Parameter HR [95% CI] p-value
CD2_BENIGN_DESCENDING_COLON 1.226 [1.09, 1.38] < 0.001
Birth year 0.995 [0.99, 1.0] 0.251

During the follow-up period (1.1.1998 — 31.12.2019), 872 out of 4109 females with CD2_BENIGN_DESCENDING_COLON died.

Males

Parameter HR [95% CI] p-value
CD2_BENIGN_DESCENDING_COLON 1.327 [1.18, 1.5] < 0.001
Birth year 0.985 [0.98, 0.99] 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 1413 out of 5120 males with CD2_BENIGN_DESCENDING_COLON died.

Mortality risk

Mortality risk for people of age

years, who have CD2_BENIGN_DESCENDING_COLON.

N-year risk Females Males
1 0.109% 0.179%
5 0.695% 1.384%
10 2.046% 3.572%
15 3.64% 6.784%
20 6.548% 11.258%

Relationships between endpoints

Index endpoint: CD2_BENIGN_DESCENDING_COLON – Benign neoplasm: Descending colon

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
loading spinner Loading data