Benign neoplasm: Cranial nerves

CD2_BENIGN_CRANIAL_NERVE

cranial nerve malignant neoplasm: Benign and malignant neoplasms that arise from one or more of the twelve cranial nerves.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 D33.3
  • Hospital discharge: ICD-9 2251
  • Hospital discharge: ICD-8 22403|2251
  • Cause of death: ICD-10 D33.3
  • Cause of death: ICD-9 2251
  • Cause of death: ICD-8 22403|2251

2 out of 7 registries used, show all original rules.

896

4. Check minimum number of events

None

896

5. Include endpoints

None

896

6. Filter based on genotype QC (FinnGen only)

870

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 D33
Name in latin Neoplasma benignum nervi cranialis

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 6100 3369 2687
Only index persons 5447 3043 2404
Unadjusted period prevalence (%)
Whole population 0.09 0.10 0.08
Only index persons 0.10 0.11 0.09
Median age at first event (years)
Whole population 56.38 56.92 55.69
Only index persons 55.98 56.46 55.36

-FinnGen-

Key figures

All Female Male
Number of individuals 870 492 378
Unadjusted period prevalence (%) 0.19 0.19 0.19
Median age at first event (years) 56.26 55.36 57.44

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint CD2_BENIGN_CRANIAL_NERVE and mortality.

Females

Parameter HR [95% CI] p-value
CD2_BENIGN_CRANIAL_NERVE 1.104 [0.96, 1.27] 0.176
Birth year 0.997 [0.99, 1.01] 0.544

During the follow-up period (1.1.1998 — 31.12.2019), 312 out of 2291 females with CD2_BENIGN_CRANIAL_NERVE died.

Males

Parameter HR [95% CI] p-value
CD2_BENIGN_CRANIAL_NERVE 0.893 [0.77, 1.04] 0.151
Birth year 0.987 [0.98, 1.0] 0.008

During the follow-up period (1.1.1998 — 31.12.2019), 296 out of 1846 males with CD2_BENIGN_CRANIAL_NERVE died.

Mortality risk

Mortality risk for people of age

years, who have CD2_BENIGN_CRANIAL_NERVE.

N-year risk Females Males
1 0.106% 0.216%
5 0.569% 1.193%
10 1.639% 2.809%
15 3.339% 5.148%
20 5.606% 8.77%

Relationships between endpoints

Index endpoint: CD2_BENIGN_CRANIAL_NERVE – Benign neoplasm: Cranial nerves

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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