Benign neoplasm: Brain, unspecified

CD2_BENIGN_BRAIN_NOS

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 D33.2&
  • Hospital discharge: ICD-9 2250
  • Hospital discharge: ICD-8 2250
  • Cause of death: ICD-10 D33.2&
  • Cause of death: ICD-9 2250
  • Cause of death: ICD-8 2250

2 out of 7 registries used, show all original rules.

203

4. Check minimum number of events

None

203

5. Include endpoints

None

203

6. Filter based on genotype QC (FinnGen only)

193

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 D33
Name in latin Neoplasma benignum cerebri non specificatum

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 2424 1453 938
Only index persons 1513 913 600
Unadjusted period prevalence (%)
Whole population 0.04 0.04 0.03
Only index persons 0.03 0.03 0.02
Median age at first event (years)
Whole population 48.74 51.26 44.54
Only index persons 42.00 45.00 37.43

-FinnGen-

Key figures

All Female Male
Number of individuals 193 116 77
Unadjusted period prevalence (%) 0.04 0.05 0.04
Median age at first event (years) 42.14 41.20 43.56

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint CD2_BENIGN_BRAIN_NOS and mortality.

Females

Parameter HR [95% CI] p-value
CD2_BENIGN_BRAIN_NOS 1.973 [1.46, 2.67] < 0.001
Birth year 0.99 [0.98, 1.0] 0.021

During the follow-up period (1.1.1998 — 31.12.2019), 87 out of 375 females with CD2_BENIGN_BRAIN_NOS died.

Males

Parameter HR [95% CI] p-value
CD2_BENIGN_BRAIN_NOS 1.925 [1.33, 2.79] < 0.001
Birth year 0.988 [0.98, 1.0] 0.015

During the follow-up period (1.1.1998 — 31.12.2019), 59 out of 249 males with CD2_BENIGN_BRAIN_NOS died.

Mortality risk

Mortality risk for people of age

years, who have CD2_BENIGN_BRAIN_NOS.

N-year risk Females Males
1 0.144% 0.407%
5 1.001% 2.468%
10 2.701% 5.618%
15 4.635% 10.786%
20 7.798% 17.817%

Relationships between endpoints

Index endpoint: CD2_BENIGN_BRAIN_NOS – Benign neoplasm: Brain, unspecified

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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