Waldenstrom macroglobulinemia, lyphoplasmocytic lymphoma

C3_MACROGLOBULINEMIA_EXALLC

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

1. Apply sex-specific rule

None

-

2. Check conditions

None

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Cause of death: ICD-10 C88.0
  • Cause of death: ICD-9 2733A
  • Cancer registry: Topography ICD-O-3 ANY
  • Cancer registry: Morphology ICD-O-3 9761|9671
  • Cancer registry: Behaviour codes 3

2 out of 7 registries used, show all original rules.

-

4. Check minimum number of events

None

-

5. Include endpoints

None

-

6. Filter based on genotype QC (FinnGen only)

None

-

Control definitions (FinnGen only)

Control exclude C3_CANCER, C3_CANCER_WIDE

Extra metadata

Level in the ICD hierarchy C
First used in FinnGen datafreeze DF8

Case counts by codes

FinnGen case counts by registry codes:

No upset plot: script not run.

No upset table: script not run.

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 945 400 536
Only index persons 690 285 405
Unadjusted period prevalence (%)
Whole population 0.01 0.01 0.01
Only index persons 0.01 0.01 0.02
Median age at first event (years)
Whole population 71.41 71.63 71.27
Only index persons 70.58 70.73 70.47

-FinnGen-

Key figures

All Female Male
Number of individuals 120 52 68
Unadjusted period prevalence (%) 0.03 0.02 0.03
Median age at first event (years) 69.72 67.11 71.72

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint C3_MACROGLOBULINEMIA_EXALLC and mortality.

Females

Parameter HR [95% CI] p-value
C3_MACROGLOBULINEMIA_EXALLC 2.649 [1.88, 3.74] < 0.001
Birth year 0.995 [0.99, 1.0] 0.222

During the follow-up period (1.1.1998 — 31.12.2019), 134 out of 278 females with C3_MACROGLOBULINEMIA_EXALLC died.

Males

Parameter HR [95% CI] p-value
C3_MACROGLOBULINEMIA_EXALLC 2.186 [1.62, 2.94] < 0.001
Birth year 0.986 [0.98, 1.0] 0.006

During the follow-up period (1.1.1998 — 31.12.2019), 170 out of 371 males with C3_MACROGLOBULINEMIA_EXALLC died.

Mortality risk

Mortality risk for people of age

years, who have C3_MACROGLOBULINEMIA_EXALLC.

N-year risk Females Males
1 0.247% 0.478%
5 1.695% 2.558%
10 3.791% 6.208%
15 6.631% 11.65%
20 12.179% 19.538%

Relationships between endpoints

Index endpoint: C3_MACROGLOBULINEMIA_EXALLC – Waldenstrom macroglobulinemia, lyphoplasmocytic lymphoma

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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