Adenocarcinoma and Papillary adenocarcinoma of kidney

C3_KIDNEY_PAPILLARYADENO_EXALLC

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

1. Apply sex-specific rule

None

-

2. Check conditions

None

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Cancer registry: Topography ICD-O-3 C64
  • Cancer registry: Morphology ICD-O-3 8260
  • Cancer registry: Behaviour codes 3

1 out of 7 registries used, show all original rules.

-

4. Check minimum number of events

None

-

5. Include endpoints

None

-

6. Filter based on genotype QC (FinnGen only)

None

-

Control definitions (FinnGen only)

Control exclude C3_CANCER, C3_CANCER_WIDE

Extra metadata

Level in the ICD hierarchy 4
First used in FinnGen datafreeze DF9

Case counts by codes

FinnGen case counts by registry codes:

No upset plot: script not run.

No upset table: script not run.

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 1451 360 1087
Only index persons 1319 332 987
Unadjusted period prevalence (%)
Whole population 0.03 0.01 0.03
Only index persons 0.03 0.01 0.04
Median age at first event (years)
Whole population 67.00 68.67 66.47
Only index persons 67.06 68.67 66.52

-FinnGen-

Key figures

All Female Male
Number of individuals 303 74 229
Unadjusted period prevalence (%) 0.09 0.03 0.12
Median age at first event (years) 67.03 67.69 66.82

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint C3_KIDNEY_PAPILLARYADENO_EXALLC and mortality.

Females

Parameter HR [95% CI] p-value
C3_KIDNEY_PAPILLARYADENO_EXALLC 3.004 [2.18, 4.14] < 0.001
Birth year 0.995 [0.99, 1.0] 0.261

During the follow-up period (1.1.1998 — 31.12.2019), 93 out of 291 females with C3_KIDNEY_PAPILLARYADENO_EXALLC died.

Males

Parameter HR [95% CI] p-value
C3_KIDNEY_PAPILLARYADENO_EXALLC 2.133 [1.65, 2.75] < 0.001
Birth year 0.989 [0.98, 1.0] 0.024

During the follow-up period (1.1.1998 — 31.12.2019), 267 out of 916 males with C3_KIDNEY_PAPILLARYADENO_EXALLC died.

Mortality risk

Mortality risk for people of age

years, who have C3_KIDNEY_PAPILLARYADENO_EXALLC.

N-year risk Females Males
1 0.237% 0.437%
5 1.818% 2.686%
10 4.126% 6.426%
15 8.038% 11.856%
20 14.133% 19.765%

Relationships between endpoints

Index endpoint: C3_KIDNEY_PAPILLARYADENO_EXALLC – Adenocarcinoma and Papillary adenocarcinoma of kidney

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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